YesW

• Description: rhamnogalacturonan lyase, generates oligosaccharides
  
  

Gene name	yesW
Synonyms
Essential	no
Product	rhamnogalacturonan lyase, generates oligosaccharides
Function	utilization of rhamnogalacturonan
Gene expression levels in SubtiExpress: yesW
MW, pI	67 kDa, 5.966
Gene length, protein length	1860 bp, 620 aa
Immediate neighbours	yesV, yesX
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

YesS regulon

The gene

Basic information

• Locus tag: BSU07050

Database entries

• BsubCyc: BSU07050

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: FG-GAP repeat (according to Swiss-Prot)

• Paralogous protein(s): YesX

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • secreted (according to Swiss-Prot)

Database entries

• BsubCyc: BSU07050

• Structure: 2Z8R

• UniProt: O31526

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: yesS-yesT-yesU-yesV-yesW-yesX-yesY-yesZ PubMed

• Expression browser: yesW PubMed

• Sigma factor:

• Regulation: induced by pectin (YesS) PubMed

• Regulatory mechanism: YesS: transcriptional activation PubMed

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

<pubmed> 19651770 17449691,17947240 , 19193638 16682770 </pubmed>