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* '''Description:''' [[two-component systems|two-component]] sensor kinase, regulation of aerobic and anaerobic respiration <br/><br/>
{{#bank: ResE}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''resE''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ypxE ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || [[two-component systems|two-component]] sensor kinase
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of aerobic and anaerobic respiration
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23110 resE]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=ResE ResE]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 66 kDa, 5.344 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1767 bp, 589 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sigX]]'', ''[[resD]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23110 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23110 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23110 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:resE_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=resE_2415415_2417184_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:resE_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23110]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[regulators of electron transport]]}},
{{SubtiWiki category|[[protein modification]]}},
{{SubtiWiki category|[[transcription factors and their control]]}},
{{SubtiWiki category|[[membrane proteins]]}},
{{SubtiWiki category|[[phosphoproteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[CcpA regulon]]}},
{{SubtiWiki regulon|[[PhoP regulon]]}},
{{SubtiWiki regulon|[[ResD regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU23110
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23110&redirect=T BSU23110]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/resABCDE.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10535]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' autophosphorylation, phosphorylation of [[ResD]]
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''[[Domains]]:'''
** two transmembrane segments
** [[PAS domain]]
** C-terminal histidine phosphotransferase domain
* '''Modification:''' autophosphorylation on a His residue
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:''' [[ResE]]-[[ResD]]
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU23110&redirect=T BSU23110]
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P35164 P35164]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU23110]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:'''
** ''[[resA]]-[[resB]]-[[resC]]-[[resD]]-[[resE]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/8631715 PubMed]
** ''[[resD]]-[[resE]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/8631715 PubMed]
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=resE_2415415_2417184_-1 resE] {{PubMed|22383849}}
* '''Sigma factor:'''
** ''[[resA]]'': [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/8631715 PubMed]
** ''[[resD]]'': [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/8631715 PubMed]
* '''Regulation:'''
** expressed under anaerobic conditions ([[ResD]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8631715,11222591 PubMed]
** expressed under conditions of phosphate limitation ([[PhoP]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/9988472 PubMed]
** repressed by glucose ([[CcpA]]) {{PubMed|16825793}}
* '''Regulatory mechanism:'''
** [[ResD]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/8631715,11222591 PubMed]
** [[PhoP]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/9988472 PubMed]
** [[CcpA]]: transcription repression {{PubMed|16825793}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed> 23046954</pubmed>
==Original publications==
<pubmed>16885456,8631715,10094672,8682783,9352926,8631715,11222591,9988472, 16825793</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 15:44, 28 August 2015