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* '''Description:''' uricase, urate oxidase <br/><br/>
{{#bank: PucL}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''pucL''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yunL ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || uricase
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|style="background:#ABCDEF;" align="center"|'''Function''' || purine utilization
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32450 pucL]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=pucL pucL]'''
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 56 kDa, 5.484 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1482 bp, 494 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pucK]]'', ''[[pucM]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32450 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32450 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32450 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:pucL_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pucL_3333162_3334646_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:pucL_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32450]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[utilization of nucleotides]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[PucR regulon]]}},
{{SubtiWiki regulon|[[TnrA regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU32450
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU32450&redirect=T BSU32450]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pucRJKLM.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13986]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate = (S)-allantoin + CO<sub>2</sub> (according to Swiss-Prot)
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU32450&redirect=T BSU32450]
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1J2G 1J2G] (with 8-Azaxanthine from ''Bacillus sp.'', 66% identity, 79% similarity)
* '''UniProt:''' [http://www.uniprot.org/uniprot/O32141 O32141]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU32450]
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.7.3.3 1.7.3.3]
=== Additional information===
=Expression and regulation=
* '''Operon:'''
** ''[[pucR]]-[[pucJ]]-[[pucK]]-[[pucL]]-[[pucM]]'' {{PubMed|12823818}}
** ''[[pucJ]]-[[pucK]]-[[pucL]]-[[pucM]]'' {{PubMed|12029039}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pucL_3333162_3334646_1 pucL] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
** ''[[pucJ]]'': [[SigA]] {{PubMed|12029039}}
* '''Regulation:'''
** expressed in the absence of good nitrogen sources (glutamine or ammonium) ([[TnrA]]) {{PubMed|12823818}}
** induced in the presence of purine nucleotides (inducer: allantoin) ([[PucR]]) {{PubMed|12029039}}
* '''Regulatory mechanism:'''
** [[TnrA]]: transcription activation {{PubMed|12823818}}
** [[PucR]]: transcription activation {{PubMed|12029039}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>11344136,12823818,12029039,12823818,12029039, 20168977 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 08:28, 30 July 2015