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* '''Description:''' [[two-component systems|two-component]] response regulator ([[transcription factors of the OmpR family|OmpR family]]), regulation of ''[[bceA]]-[[bceB]]'' in response to bacitracin, plectasin, mersacidin and actagardine <br/><br/>
{{#bank: BceR}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''bceR''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ytsA''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || [[two-component systems|two-component]] response regulator ([[transcription factors of the OmpR family|OmpR family]])
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || resistance against  toxic peptides
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30400 bceR]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=BceR BceR]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 26 kDa, 5.289 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 693 bp, 231 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bceS]]'', ''[[ytrF]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30400 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:ytsA_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bceR_3113187_3113882_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:bceR_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30400]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[transcription factors and their control]]}},
{{SubtiWiki category|[[resistance against toxins/ antibiotics]]}},
{{SubtiWiki category|[[phosphoproteins]]}}
= This gene is a member of the following [[regulons]] =
=The [[BceR regulon]]:=
* ''[[bceA]]-[[bceB]]''
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU30400
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30400&redirect=T BSU30400]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/bceRS.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12340]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' [[transcription factors of the OmpR family|OmpR family]]
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:''' phosphorylated by [[BceS]] on an Asp residue
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[BceS]]-[[BceR]] {{PubMed|25118291}}
* '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30400&redirect=T BSU30400]
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34951 O34951]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30400]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[bceR]]-[[bceS]]'' {{PubMed|12399481}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bceR_3113187_3113882_-1 bceR] {{PubMed|22383849}}
* '''Sigma factor:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>10094672,18394148,12890034,14651641, 21283517, 20606066, 17905982 25118291 22964256,21078927</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 08:59, 24 July 2015