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| * '''Description:''' lysine-8-amino-7-oxononanoate aminotransferase <br/><br/>
| | {{#bank: BioA}} |
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| {| align="right" border="1" cellpadding="2"
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| |style="background:#ABCDEF;" align="center"|'''Gene name'''
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| |''bioA''
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| |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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| |style="background:#ABCDEF;" align="center"| '''Essential''' || no
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| |style="background:#ABCDEF;" align="center"| '''Product''' || lysine-8-amino-7-oxononanoate aminotransferase
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| |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of biotin
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30230 bioA]
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=bioA bioA]'''
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| |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 5.32
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| |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1344 bp, 448 aa
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| |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bioF]]'', ''[[bioW]]''
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| |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30230 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30230 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30230 DNA_with_flanks]
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| |colspan="2" | '''Genetic context''' <br/> [[Image:bioA_context.gif]]
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| <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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| |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bioK_3093343_3094689_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:bioA_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30230]]
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| |}
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| __TOC__
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/>
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| = [[Categories]] containing this gene/protein =
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| {{SubtiWiki category|[[biosynthesis of cofactors]]}}
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| = This gene is a member of the following [[regulons]] =
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| {{SubtiWiki regulon|[[BirA regulon]]}}
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| =The gene=
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| === Basic information ===
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| * '''Locus tag:''' BSU30230
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| ===Phenotypes of a mutant ===
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| === Database entries ===
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| * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30230&redirect=T BSU30230]
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| * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/bioWAFDBI-ytbQ.html]
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| * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11524]
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| === Additional information===
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| =The protein=
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| === Basic information/ Evolution ===
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| * '''Catalyzed reaction/ biological activity:'''
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| * '''Protein family:''' class-III pyridoxal-phosphate-dependent aminotransferase family (according to Swiss-Prot)
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| * '''Paralogous protein(s):'''
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| === Extended information on the protein ===
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| * '''Kinetic information:'''
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| * '''Domains:'''
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| * '''Modification:'''
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| * '''Cofactor(s):'''
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| * '''Effectors of protein activity:'''
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| * '''[[SubtInteract|Interactions]]:'''
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| * '''[[Localization]]:'''
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| === Database entries ===
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| * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30230&redirect=T BSU30230]
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| * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3DRD 3DRD]
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| * '''UniProt:''' [http://www.uniprot.org/uniprot/P53555 P53555]
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| * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30230]
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| * '''E.C. number:''' [http://www.expasy.org/enzyme/2.6.1.62 2.6.1.62]
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| === Additional information===
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| =Expression and regulation=
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| * '''Operon:''' ''[[bioW]]-[[bioA]]-[[bioF]]-[[bioD]]-[[bioB]]-[[bioI]]-[[ytbQ]]'' {{PubMed|8763940,8892842}}
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| * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bioK_3093343_3094689_-1 bioA] {{PubMed|22383849}}
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| * '''Sigma factor:'''
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| * '''Regulation:'''
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| ** repressed in the presence of biotin ([[BirA]]) {{PubMed|8763940,8892842}}
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| * '''Regulatory mechanism:'''
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| ** [[BirA]]: transcription repression {{PubMed|8763940,8892842}}
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| * '''Additional information:'''
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| ** number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 5350 {{PubMed|21395229}}
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| ** number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 2260 {{PubMed|21395229}}
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| ** number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 2738 {{PubMed|21395229}}
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| =Biological materials =
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| * '''Mutant:'''
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| * '''Expression vector:'''
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| * '''lacZ fusion:'''
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| * '''GFP fusion:'''
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| * '''two-hybrid system:'''
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| * '''Antibody:'''
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| =Labs working on this gene/protein=
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| =Your additional remarks=
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| =References=
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| ==Reviews: {{PubMed|21437340}}==
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| ==Original publications==
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| <pubmed>8763940,15880481,8892842,</pubmed>
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| [[Category:Protein-coding genes]]
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