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* '''Description:''' flagellar basal-body rod protein <br/><br/>
{{#bank: FlgC}}


{| align="right" border="1" cellpadding="2"
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''flgC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Product''' || flagellar basal-body rod protein
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|style="background:#ABCDEF;" align="center"|'''Function''' || movement and chemotaxis
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16190 flgC]
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 5.733 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 450 bp, 150 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[flgB]]'', ''[[fliE]]''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16190 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16190 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16190 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:flgC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=flgC_1691667_1692119_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:flgC_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16190]]
|-
|}
__TOC__
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<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[motility and chemotaxis]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[CodY regulon]]}},
{{SubtiWiki regulon|[[DegU regulon]]}},
{{SubtiWiki regulon|[[SigD regulon]]}},
{{SubtiWiki regulon|[[Spo0A regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU16190
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU16190&redirect=T BSU16190]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/fla-che.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10238]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' flagella basal body rod proteins family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:''' bacterial flagellum basal body (according to Swiss-Prot),  extracellular (no signal peptide) [http://www.ncbi.nlm.nih.gov/pubmed/18957862 PubMed]
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU16190&redirect=T BSU16190]
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P24501 P24501]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU16190]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[flgB]]-[[flgC]]-[[fliE]]-[[fliF]]-[[fliG]]-[[fliH]]-[[fliI]]-[[fliJ]]-[[ylxF]]-[[fliK]]-[[flgD]]-[[flgE]]-[[fliL]]-[[fliM]]-[[fliY]]-[[cheY]]-[[fliZ]]-[[fliP]]-[[fliQ]]-[[fliR]]-[[flhB]]-[[flhA]]-[[flhF]]-[[flhG]]-[[cheB]]-[[cheA]]-[[cheW]]-[[cheC]]-[[cheD]]-[[sigD]]-[[swrB]]'' {{PubMed|9657996,8157612,15175317}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=flgC_1691667_1692119_1 flgC] {{PubMed|22383849}}
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|9657996}}, [[SigD]] {{PubMed|9657996}}
* '''Regulation:'''
** repressed under conditions that trigger sporulation ([[Spo0A]]) {{PubMed|14651647}}
* '''Regulatory mechanism:'''
** [[Spo0A]]: transcription repression {{PubMed|14651647}}
** [[CodY]]: transcription repression {{PubMed|12730172}}
** [[DegU]] (non-phosphorylated): transcription activation {{PubMed|17850253}}
** [[DegU]]-P: transcription repression {{PubMed|24386445}}
** [[DegU]]-P in complex with [[SwrA]]: transcription activation {{PubMed|24386445}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>1905667,17850253,14651647,18957862, 9657996,8157612,15175317 24386445</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:09, 12 February 2015