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BsrB: Difference between revisions

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* '''Description:''' 6S RNA<br/><br/>
{{#bank: BsrB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''bsrB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || 6S RNA
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|style="background:#ABCDEF;" align="center"|'''Function''' || antagonist of [[SigA]]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this RNA in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=BsrB BsrB]
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|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  203 bp
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yocI]]'', ''[[azoR1]]''
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:BsrB_context.gif]]
|-
|}
__TOC__
<br/><br/>
<br/><br/><br/><br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[sigma factors and their control]]}},
{{SubtiWiki category|[[ncRNA]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU_misc_RNA_32
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU_MISC_RNA_32&redirect=T BSU_misc_RNA_32]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/bsrB.html]
* '''SubtiList entry:''' no entry
* '''Structure:'''
=== Additional information===
* '''Similar RNA:''' ''[[bsrA]]''
* '''[[SubtInteract|Interactions]]:''' [[BsrB]]-[[SigA]]-[[RNA polymerase]]
=Expression and regulation=
* '''Operon:''' ''bsrB'' [http://www.ncbi.nlm.nih.gov/sites/entrez/11886746 PubMed]
* '''[[Sigma factor]]:'''
* '''Regulation:''' expressed during vegetative growth[http://www.ncbi.nlm.nih.gov/sites/entrez/11886746 PubMed]
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
=Labs working on this gene/RNA=
* Kouji Nakamura, Tsukuba, University, Japan
* [[Roland Hartmann]], Philipps-Universität Marburg, Marburg, Germany, [http://www.uni-marburg.de/fb16/ipc/ag_hartmann homepage]
=Your additional remarks=
=References=
== Reviews ==
<pubmed> 24308327 24742053 24786589 25483037 </pubmed>
== Original publications ==
<pubmed>11886746 15811922, 23457253,22333917,21881410,22102588 23761441 24464747 </pubmed>
[[Category:small RNA]]

Latest revision as of 10:22, 13 January 2015