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* '''Description:''' late competence gene <br/><br/>
{{#bank: ComFB}}


{| align="right" border="1" cellpadding="2"
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''comFB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
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|style="background:#ABCDEF;" align="center"|'''Function''' || compentence
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35460 comFB]
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 10 kDa, 4.827 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 294 bp, 98 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[comFC]]'', ''[[comFA]]''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35460 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:comFB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=comFB_3641811_3642107_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:comFB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU35460]]
|-
|}
__TOC__
<br/><br/><br/><br/>
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<br/><br/><br/><br/>
<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[genetic competence]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[ComK regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU35460
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35460&redirect=T BSU35460]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/comFABC-yvyF-flgM-yvyG-flgKL.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10396]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''[[Domains]]:'''
* '''Modification:'''
* '''[[Cofactors]]:'''
** Zn {{PubMed|25423369}}
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** forms dimers {{PubMed|25423369}}
** cytoplasma {{PubMed|25423369}}
** localizes to one or both cell poles {{PubMed|21278288}}
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35460&redirect=T BSU35460]
* '''Structure:''' [http://pdb.org/pdb/search/structidSearch.do?structureId=4WAI 4WAI] {{PubMed|25423369}}
* '''UniProt:''' [http://www.uniprot.org/uniprot/P39146 P39146]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU35460]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[comFA]]-[[comFB]]-[[comFC]]-[[yvyF]]-[[flgM]]-[[flgN]]-[[flgK]]-[[flgL]]'' {{PubMed|8412657}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=comFB_3641811_3642107_-1 comFB] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''  ''[[comFA]]'': [[SigA]] {{PubMed|8412657}}
* '''Regulation:'''
* '''Regulatory mechanism:'''
** [[ComK]]: transcription activation {{PubMed|8412657}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>11814663,8412657,21278288, 25423369 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 10:24, 26 November 2014