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* '''Description:''' DNA mismatch repair <br/><br/>
{{#bank: MutL}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''mutL''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || DNA mismatch repair
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || DNA repair
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU17050 mutL]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=MutL MutL]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 70 kDa, 5.583 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1881 bp, 627 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mutS]]'', ''[[ymzD]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU17050 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU17050 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU17050 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:mutL_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mutL_1778337_1780220_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:mutL_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU17050]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[DNA repair/ recombination]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU17050
===Phenotypes of a mutant ===
* 60-fold increased mutation rate {{PubMed|23882084}}
* a ''[[rnhB]] [[mutS]]-[[mutL]]'' mutant is not viable {{PubMed|23882084}}
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU17050&redirect=T BSU17050]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mutSL.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11402]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' DNA mismatch repair mutL/hexB family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[MutL]] (C-terminal domain)-[[DnaN]] {{PubMed|21050827}}
** [[DnaE]]-[[MutL]] {{PubMed|21958350}}
** [[MutL]]-[[MutS]] {{PubMed|23998896}}
* '''[[Localization]]:'''
** forms foci at midcell position, the frequency of foci increases upon mismatch formation {{PubMed|21958350}}
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU17050&redirect=T BSU17050]
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3KDK 3KDK] (C-terminal domain) {{PubMed|20603082}}
* '''UniProt:''' [http://www.uniprot.org/uniprot/P49850 P49850]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU17050]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[mutS]]-[[mutL]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/8760914 PubMed]
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mutL_1778337_1780220_1 mutL] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
** A [[ncRNA]] is predicted between ''[[mutL]]'' and ''[[ymzD]]'' {{PubMed|20525796}}
=Biological materials =
* '''Mutant:'''
** GP1190 (del ''[[mutS]]-[[mutL]]''::''aphA3'') {{PubMed|22178973}}, available in [[Jörg Stülke]]'s lab
** 1A833 ( ''mutL''::''spec''), {{PubMed|11779496}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A833&Search=1A833 BGSC]
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed> 22933559 </pubmed>
== Original publications ==
<pubmed>8760914, 15375129, 20603082 20525796 22843852 21050827,21958350 22178973 23882084 23998896 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 13:41, 27 October 2014