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* '''Description:''' thiol-disulfide oxidoreductase <br/><br/>
{{#bank: BdbB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''bdbB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yolK ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || thiol-disulfide oxidoreductase
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || oxidative folding of proteins
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21440 bdbB]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in  [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=BdbB BdbB]'''
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 9.415 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 444 bp, 148 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bhlB]]'', ''[[sunS]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU21440 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU21440 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU21440 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:bdbB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bdbB_2265225_2265671_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:bdbB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU21440]]
|-
|}
__TOC__
<br/><br/><br/><br/>
<br/><br/><br/><br/>
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<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[chaperones/ protein folding]]}},
{{SubtiWiki category|[[SP-beta prophage]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[Abh regulon]]}},
{{SubtiWiki regulon|[[AbrB regulon]]}},
{{SubtiWiki regulon|[[Rok regulon]]}},
{{SubtiWiki regulon|[[YvrHb regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU21440
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU21440&redirect=T BSU21440]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sunT-bdbA-yolJ-bdbB.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13587]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
** oxidative folding of [[SunA]] (together with [[BdbC]])
* '''Protein family:''' NAD-dependent glycerol-3-phosphate dehydrogenase family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU21440&redirect=T BSU21440]
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P68571 P68571]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU21440]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
** '''Operon:''' ''[[sunT]]-[[bdbA]]-[[sunS]]-[[bdbB]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/16306698 PubMed]
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bdbB_2265225_2265671_-1 bdbB] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
** repressed by [[Rok]] [http://www.ncbi.nlm.nih.gov/sites/entrez/15743949 PubMed]
* '''Regulatory mechanism:'''
** activated by [[YvrHb]]  [http://www.ncbi.nlm.nih.gov/sites/entrez/16306698 PubMed]
** [[Rok]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15743949 PubMed]
** [[AbrB]]: transcription repression{{PubMed|20817675}}
** [[Abh]]: transcription activation {{PubMed|20817675}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>11872755 15743949,20817675 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 10:41, 19 September 2014