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| * '''Description:''' surfactin synthetase / competence <br/><br/>
| | {{#bank: SrfAD}} |
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| {| align="right" border="1" cellpadding="2"
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| |style="background:#ABCDEF;" align="center"|'''Gene name'''
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| |''srfAD''
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| |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''comL ''
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| |-
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| |style="background:#ABCDEF;" align="center"| '''Essential''' || no
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| |style="background:#ABCDEF;" align="center"| '''Product''' || surfactin synthetase / competence
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| |-
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| |style="background:#ABCDEF;" align="center"|'''Function''' || antibiotic synthesis
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03520 srfAD]
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| |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 5.22
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| |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 726 bp, 242 aa
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| |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[srfAC]]'', ''[[ycxA]]''
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| |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03520 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03520 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03520 DNA_with_flanks]
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| |colspan="2" | '''Genetic context''' <br/> [[Image:srfAD_context.gif]]
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| <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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| |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=srfAD_402388_403116_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:srfAD_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03520]]
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| |}
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| __TOC__
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/>
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| = [[Categories]] containing this gene/protein =
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| {{SubtiWiki category|[[miscellaneous metabolic pathways]]}},
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| {{SubtiWiki category|[[biosynthesis of antibacterial compounds]]}},
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| [[most abundant proteins]]
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| = This gene is a member of the following [[regulons]] =
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| {{SubtiWiki regulon|[[Abh regulon]]}},
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| {{SubtiWiki regulon|[[CodY regulon]]}},
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| {{SubtiWiki regulon|[[ComA regulon]]}},
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| {{SubtiWiki regulon|[[PerR regulon]]}},
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| {{SubtiWiki regulon|[[Spx regulon]]}}
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| =The gene=
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| === Basic information ===
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| * '''Locus tag:''' BSU03520
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| ===Phenotypes of a mutant ===
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| === Database entries ===
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| * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03520&redirect=T BSU03520]
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| * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/srfAA-srfAB-comS-srfAC-srfAD.html]
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| * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10171]
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| === Additional information===
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| =The protein=
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| === Basic information/ Evolution ===
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| * '''Catalyzed reaction/ biological activity:'''
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| * '''Protein family:''' thioesterase family (according to Swiss-Prot)
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| * '''Paralogous protein(s):'''
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| === Extended information on the protein ===
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| * '''Kinetic information:'''
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| * '''[[Domains]]:'''
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| * '''Modification:'''
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| * '''[[Cofactors]]:'''
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| * '''Effectors of protein activity:'''
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| * '''[[SubtInteract|Interactions]]:'''
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| * '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)
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| === Database entries ===
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| * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03520&redirect=T BSU03520]
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| * '''Structure:''' [http://www.proteopedia.org/wiki/index.php/2ron 2RON], [http://www.proteopedia.org/wiki/index.php/2k2q 2K2Q]
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| * '''UniProt:''' [http://www.uniprot.org/uniprot/Q08788 Q08788]
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| * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU03520]
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| * '''E.C. number:'''
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| === Additional information===
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| =Expression and regulation=
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| * '''Operon:''' ''[[srfAA]]-[[srfAB]]-[[comS]]-[[srfAC]]-[[srfAD]]'' {{PubMed|1715856}}
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| * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=srfAD_402388_403116_1 srfAD] {{PubMed|22383849}}
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| * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|1715856}}
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| * '''Regulation:'''
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| ** repressed during growth in the presence of branched chain amino acids ([[CodY]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8830686 PubMed]
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| ** repressed during hydrogen peroxide stress ([[PerR]]) {{PubMed|16166527}}
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| ** expressed at high cell density ([[ComA]]) {{PubMed|16091051}}
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| * '''Regulatory mechanism:'''
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| ** [[CodY]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/8830686 PubMed]
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| ** [[ComA]]: transcription activation {{PubMed|1715856,16091051}}
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| ** [[PerR]]: transcription activation {{PubMed|16166527}}
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| ** [[Spx]]: transcription repression {{PubMed|12642660}}
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| ** [[Abh]]: transcription repression{{PubMed|20817675}}
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| * '''Additional information:'''
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| ** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}
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| ** number of protein molecules per cell (minimal medium with glucose and ammonium): 1861 {{PubMed|24696501}}
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| ** number of protein molecules per cell (complex medium with amino acids, without glucose): 503 {{PubMed|24696501}}
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| =Biological materials =
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| * '''Mutant:'''
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| * '''Expression vector:'''
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| * '''lacZ fusion:'''
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| * '''GFP fusion:'''
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| * '''two-hybrid system:'''
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| * '''Antibody:'''
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| =Labs working on this gene/protein=
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| =Your additional remarks=
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| =References=
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| ==Reviews==
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| <pubmed>20735481 </pubmed>
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| ==Original publications==
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| <pubmed>18704089,16166527,17227471, 17190806,8830686, 1715856 12642660 16091051 22511326,20817675 15378759</pubmed>
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| [[Category:Protein-coding genes]]
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