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* '''Description:''' class III heat-shock protein (molecular chaperone) <br/><br/>
{{#bank: HtpG}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''htpG''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yxbB ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || class III heat-shock protein (molecular chaperone)
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|style="background:#ABCDEF;" align="center"|'''Function''' || chaperone
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU39820 htpG]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=htpG htpG]'''
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 72 kDa, 4.668 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1878 bp, 626 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[csbC]]'', ''[[yxcA]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39820 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39820 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39820 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:htpG_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=htpG_4089429_4091309_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:htpG_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU39820]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[chaperones/ protein folding]]}},
{{SubtiWiki category|[[heat shock proteins]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU39820
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39820&redirect=T BSU39820]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/htpG.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11359]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' heat shock protein 90 family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** cytoplasm (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39820&redirect=T BSU39820]
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2IOQ 2IOQ] (from ''Escherichia coli'', 39% identity, 61% similarity) {{PubMed|17055434}}
* '''UniProt:''' [http://www.uniprot.org/uniprot/P46208 P46208]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU39820]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''htpG'' {{PubMed|9150201}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=htpG_4089429_4091309_-1 htpG] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|9150201}}
* '''Regulation:''' induced by high temperature {{PubMed|9150201}}
* '''Regulatory mechanism:''' unknown
* '''Additional information:'''
** number of protein molecules per cell (minimal medium with glucose and ammonium): 1849 {{PubMed|24696501}}
** number of protein molecules per cell (complex medium with amino acids, without glucose): 2904 {{PubMed|24696501}}
=Biological materials =
* '''Mutant:''' GP1159 (del cat) available in the [[Stülke]] lab
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
[[Wolfgang Schumann]], Bayreuth University, Germany [http://www.genetik.uni-bayreuth.de/LSGenetik1/schumann_research.htm Homepage]
=Your additional remarks=
=References=
<pubmed>9150201,12511492,10323241,, </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:08, 17 April 2014