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* '''Description:''' cyclase-like protein <br/><br/>
{{#bank: HisF}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''hisF''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Product''' || cyclase-like protein
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of histidine
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34870 hisF]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=hisF hisF]'''
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 5.238 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 756 bp, 252 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[hisI]]'', ''[[hisA]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34870 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:hisF_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=hisF_3583562_3584320_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:hisF_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34870]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis/ acquisition of amino acids]]}},
[[most abundant proteins]]
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU34870
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34870&redirect=T BSU34870]
* '''DBTBS entry:''' no entry
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12600]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide + L-glutamine = imidazole-glycerol phosphate + 5-aminoimidazol-4-carboxamide ribonucleotide + L-glutamate + H<sub>2</sub>O (according to Swiss-Prot)
* '''Protein family:''' hisA/hisF family (according to Swiss-Prot)
* '''Paralogous protein(s):''' [[HisA]]
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''[[Domains]]:'''
* '''Modification:'''
* '''[[Cofactors]]:'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** cytoplasm (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU34870&redirect=T BSU34870]
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34727 O34727]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU34870]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[hisZ]]-[[hisG]]-[[hisD]]-[[hisB]]-[[hisH]]-[[hisA]]-[[hisF]]-[[hisI]]'' {{PubMed|12107147}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=hisF_3583562_3584320_-1 hisF] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:''' repressed by casamino acids {{PubMed|12107147}}
* '''Regulatory mechanism:'''
* '''Additional information:'''
** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}
** number of protein molecules per cell (minimal medium with glucose and ammonium): 601 {{PubMed|24696501}}
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>12107147, 15378759</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:08, 17 April 2014