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BrxB: Difference between revisions

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* '''Description:''' bacilliredoxin <br/><br/>
{{#bank: BrxB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''brxB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yqiW ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || bacilliredoxin
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|style="background:#ABCDEF;" align="center"|'''Function''' || de-bacillithiolation of S-bacillithiolated [[OhrR]] and [[MetE]]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23990 brxB]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=BrxB BrxB]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 4.814 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 435 bp, 145 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[artP]]'', ''[[bmrU]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23990 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yqiW_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqiW_2493064_2493501_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yqiW_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23990]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[membrane proteins]]}},
{{SubtiWiki category|[[resistance against oxidative and electrophile stress]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU23990
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqiW.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11726]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
** de-bacillithiolation of S-bacillithiolated [[OhrR]] and [[MetE]] {{PubMed|24313874}}
* '''Protein family:''' UPF0403 family (according to Swiss-Prot)
* '''Paralogous protein(s):''' [[BrxA]]
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''[[Domains]]:''' contains an CxC redox motif redox active Cys residue [http://www.ncbi.nlm.nih.gov/pubmed/20308541]
* '''Modification:'''
* '''[[Cofactors]]:'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[BrxB]]-[[MetE]] {{PubMed|24313874}}
** [[BrxB]]-[[OhrR]] {{PubMed|24313874}}
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot)
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P54534 P54534]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU23990]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''brxB'' (according to [http://dbtbs.hgc.jp/COG/prom/yqiW.html DBTBS])
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yqiW_2493064_2493501_-1 brxB] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
[[YpdA]], [[BrxA]], [[BrxB]] and [[YtxJ]] cooccur in those species predicted to synthesize bacillithiol.
=References=
<pubmed> 24313874  20308541</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 11:24, 17 April 2014