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* '''Description:''' copper transport protein, metallochaperone <br/><br/>
{{#bank: CopZ}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''copZ''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yvgY ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || copper transport protein, metallochaperone
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to copper
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33510 copZ]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=CopZ CopZ]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in  [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=CopZ CopZ]'''
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 4.162 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 207 bp, 69 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[copA]]'', ''[[csoR]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33510 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33510 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33510 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yvgY_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=copZ_3443613_3443822_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:copZ_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33510]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[transporters/ other]]}},
{{SubtiWiki category|[[trace metal homeostasis (Cu, Zn, Ni, Mn, Mo)]]}},
{{SubtiWiki category|[[resistance against toxic metals]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[CsoR regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU33510
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU33510&redirect=T BSU33510]
* '''DBTBS entry:''' no entry
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG14107]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):''' carries a tetranuclear Cu(I) cluster (as [Cu4(S-Cys)4(N-His)2] cluster) {{PubMed|19746989}}
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[CopA]]-[[CopZ]], for the transfer of the Cu(I) cluster {{PubMed|19751213}}
* '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU33510&redirect=T BSU33510]
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2QIF 2QIF]
* '''UniProt:''' [http://www.uniprot.org/uniprot/O32221 O32221]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU33510]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[copZ]]-[[copA]]'' {{PubMed|12779235}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=copZ_3443613_3443822_-1 copZ] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|12779235}}
* '''Regulation:'''
** induced by copper ([[CsoR]]) {{PubMed|18048925,12779235}}
* '''Regulatory mechanism:'''
** [[CsoR]]: transcription repression {{PubMed|18048925}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
[[John Helmann]], Cornell University, USA [http://www.micro.cornell.edu/research/labs/helmann-lab/index.cfm Homepage]
=Your additional remarks=
=References=
==Reviews==
<pubmed> 19824702 </pubmed>
==Original publications==
<pubmed>18361527,11922674,12590580,14663075,12779235,12644235,18048925,19170606,14514665,14711369, 15212800 19170606 19746989 19751213 18419582 22370900 12238948 11980486 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 09:45, 17 April 2014