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MurAB: Difference between revisions

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* '''Description:''' UDP-N-acetylglucosamine 1-carboxyvinyltransferase <br/><br/>
{{#bank: MurAB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''murAB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''murZ, lssF, rev-4 ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Product''' || UDP-N-acetylglucosamine 1-carboxyvinyltransferase
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|style="background:#ABCDEF;" align="center"|'''Function''' || peptidoglycan precursor biosynthesis
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU37100 murAB]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=murAB murAB]'''
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 45 kDa, 5.831 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1287 bp, 429 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[glpX]]'', ''[[ywjH]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37100 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37100 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37100 DNA_with_flanks]
|-
|-
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|colspan="2" | '''Genetic context''' <br/> [[Image:murAB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=murAB_3806086_3807375_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:murAB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU37100]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[cell wall synthesis]]}},
{{SubtiWiki category|[[biosynthesis of cell wall components]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU37100
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU37100&redirect=T BSU37100]
* '''DBTBS entry:''' no entry
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10414]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' Phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine (according to Swiss-Prot)
* '''Protein family:''' MurA subfamily (according to Swiss-Prot)
* '''Paralogous protein(s):''' [[MurAA]]
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU37100&redirect=T BSU37100]
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3SG1 3SG1] (from ''B. anthracis'', 50% identity, 81% similarity)
* '''UniProt:''' [http://www.uniprot.org/uniprot/P19670 P19670]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU37100]
* '''E.C. number:''' [http://www.expasy.org/enzyme/2.5.1.7 2.5.1.7]
=== Additional information===
=Expression and regulation=
* '''Operon:''''' [[murAB]]-[[glpX]]''  [http://www.ncbi.nlm.nih.gov/sites/entrez/19270101 PubMed]
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=murAB_3806086_3807375_-1 murAB] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:''' constitutive  [http://www.ncbi.nlm.nih.gov/sites/entrez/19270101 PubMed]
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
**pGP2595: (IPTG inducible expression, purification in ''E. coli'' with N-terminal His-tag, in [[pWH844]]), available in [[Jörg Stülke]]'s lab
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
== Reviews ==
<pubmed> 21822642 </pubmed>
== Original publications ==
<pubmed>19270101  </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 09:33, 17 April 2014