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* '''Description:''' endolevanase <br/><br/>
{{#bank: LevB}}


{| align="right" border="1" cellpadding="2"
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''levB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yveB ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Product''' || endolevanase
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|style="background:#ABCDEF;" align="center"|'''Function''' || levan degradation
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34460 levB]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=levB levB]'''
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 58 kDa, 4.993 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1548 bp, 516 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sacB]]'', ''[[yveA]]''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34460 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yveB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=levB_3537507_3539057_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:levB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34460]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[utilization of specific carbon sources]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[DegU regulon]]}},
{{SubtiWiki regulon|[[SacY regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU34460
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sacB-yveBA.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12430]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' Hydrolysis of (2->6)-beta-D-fructofuranan, to remove successive disaccharide residues as levanbiose, i (according to Swiss-Prot)
* '''Protein family:''' glycosyl hydrolase 32 family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** cell membrane (according to Swiss-Prot)
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/O07003 O07003]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU34460]
* '''E.C. number:''' [http://www.expasy.org/enzyme/3.2.1.64 3.2.1.64]
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[sacB]]-[[levB]]-[[yveA]]'' {{PubMed|11739774}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=levB_3537507_3539057_1 levB] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|2428811}}
* '''Regulation:'''
** induction by sucrose (at high concentration) ([[SacY]]) {{PubMed|3039303}}
* '''Regulatory mechanism:'''
** [[SacY]]: binding to a [[RNA switch]] (transcriptional antitermination) {{PubMed|3039303}}
** [[DegU]]-P: transcription activation {{PubMed|2428811}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>11739774 2428811 3039303</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:50, 2 April 2014