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| * '''Description:''' co-[[sigma factor]] (with [[YvrI]]) <br/><br/>
| | {{#bank: YvrHa}} |
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| {| align="right" border="1" cellpadding="2"
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| |style="background:#ABCDEF;" align="center"|'''Gene name'''
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| |''yvrHa''
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| |-
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| |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' rsoA''
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| |-
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| |style="background:#ABCDEF;" align="center"| '''Essential''' || no
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| |-
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| |style="background:#ABCDEF;" align="center"| '''Product''' || co-[[sigma factor]] (with [[YvrI]])
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| |-
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| |style="background:#ABCDEF;" align="center"|'''Function''' || [[RNA polymerase]] [[sigma factor]]
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| |-
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33222 yvrHa]
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=YvrHA YvrHA]
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| |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 9.5 kDa, 4.686
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| |-
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| |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 237 bp, 79 aa
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| |-
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| |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvrHb]]'', ''[[yvrI]]''
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| |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt Gene sequence (+200bp) ]'''
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| |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_protein.txt Protein sequence]'''
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| |colspan="2" | '''Genetic context''' <br/> [[Image:YvrHa_yvrHb_context.GIF]]
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| |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rsoA_3409219_3409458_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:yvrHa_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33222]]
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| |-
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| |}
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| __TOC__
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/>
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| = [[Categories]] containing this gene/protein =
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| {{SubtiWiki category|[[transcription]]}},
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| {{SubtiWiki category|[[sigma factors and their control]]}},
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| {{SubtiWiki category|[[acid stress proteins (controlled by YvrI-YvrHa)]]}}
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| = This gene is a member of the following [[regulons]] =
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| {{SubtiWiki regulon|[[YvrHb regulon]]}},
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| {{SubtiWiki regulon|[[YvrI-YvrHa regulon]]}}
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| =The [[YvrI-YvrHa regulon]]=
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| * ''[[oxdC]]-[[yvrL]]''
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| * ''[[yvrI]]-[[yvrHa]]''
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| * ''[[yvrJ]]''
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| =The gene=
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| === Basic information ===
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| * '''Locus tag:''' BSU33222
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| ===Phenotypes of a mutant ===
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| === Database entries ===
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| * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yvrI-yvrHa.html]
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| * '''SubtiList entry:''' does not exist
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| === Additional information===
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| The sequence of the former ''yvrH'' gene was corrected, and does now contain two genes, ''[[yvrHa]]'' and ''[[yvrHb]]''.
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| =The protein=
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| === Basic information/ Evolution ===
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| * '''Catalyzed reaction/ biological activity:'''
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| * '''Protein family:'''
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| * '''Paralogous protein(s):'''
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| === Extended information on the protein ===
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| * '''Kinetic information:'''
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| * '''Domains:''' corresponds to region 2 of a [[sigma factor]] {{PubMed|19940246}}
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| * '''Modification:'''
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| * '''Cofactor(s):'''
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| * '''Effectors of protein activity:'''
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| * '''[[SubtInteract|Interactions]]:'''
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| ** [[YvrHa]]-[[RpoC]] {{PubMed|19940246}}
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| ** [[YvrI]]-[[YvrHa]] {{PubMed|19940246}}
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| * '''[[Localization]]:'''
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| === Database entries ===
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| * '''Structure:'''
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| * '''UniProt:''' [http://www.uniprot.org/uniprot/C0H3R4 C0H3R4]
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| * '''KEGG entry:''' no entry
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| * '''E.C. number:'''
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| === Additional information===
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| =Expression and regulation=
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| * '''Operon:''' ''[[yvrI]]-[[yvrHa]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed]
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| * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rsoA_3409219_3409458_-1 yvrHa] {{PubMed|22383849}}
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| * '''Sigma factor:''' [[YvrI]]-[[YvrHa]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed]
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| * '''Regulation:''' induced by acidic growth conditions [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed]
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| * '''Regulatory mechanism:''' activated by [[YvrHb]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16306698 PubMed]
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| * '''Additional information:'''
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| =Biological materials =
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| * '''Mutant:'''
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| * '''Expression vector:'''
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| * '''lacZ fusion:'''
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| * '''GFP fusion:'''
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| * '''two-hybrid system:'''
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| * '''Antibody:'''
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| =Labs working on this gene/protein=
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| [[John Helmann]], Cornell University, USA [http://www.micro.cornell.edu/research/labs/helmann-lab/index.cfm Homepage]
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| =Your additional remarks=
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| =References=
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| <pubmed>18573182, 19940246,19047353,19047353, </pubmed>
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| [[Category:Protein-coding genes]]
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