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FisB: Difference between revisions

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* '''Description:''' membrane fission protein, mediates membrane fission during [[sporulation]]<br/><br/>
{{#bank: FisB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''fisB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' yunB''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || membrane fission protein
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|style="background:#ABCDEF;" align="center"|'''Function''' || release of the forespore into the mother cell cytoplasm
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32350 fisB]
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 9.529 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 762 bp, 254 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytH]]'', ''[[yunC]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32350 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yunB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yunB_3322463_3323227_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yunB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32350]]
|-
|}
__TOC__
<br/><br/><br/><br/>
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<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[membrane dynamics]]}},
{{SubtiWiki category|[[sporulation proteins]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[SigE regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU32350
===Phenotypes of a mutant ===
* reduced sporulation efficiency (12 - 15%) {{PubMed|23388828}}
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yunB.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13976]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
** mediates membrane fission during [[sporulation]] {{PubMed|23388828}}
** binds cardiolipin {{PubMed|23388828}}
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** cell membrane {{PubMed|23388828}}
** forms dynamic foci which become immobilized at the site of membrane fission {{PubMed|23388828}}
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/O32131 O32131]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU32350]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''fisB'' {{PubMed|12662922}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yunB_3322463_3323227_-1 fisB] {{PubMed|22383849}}
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12662922}}
* '''Regulation:'''
** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190,12662922}}
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed> 23518060 </pubmed>
==Original publications==
<pubmed>12662922,15699190, 23388828 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:40, 2 April 2014