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* '''Description:''' dynamin-like protein, mediates membrane fusion<br/><br/>
{{#bank: DynA}}


{| align="right" border="1" cellpadding="2"
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''dynA''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ypbR ''
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Product''' || dynamin-like protein
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|style="background:#ABCDEF;" align="center"|'''Function''' || fusion of membranes
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU22030 dynA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=DynA DynA]
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 137 kDa, 5.724 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 3579 bp, 1193 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ypbS]]'', ''[[fbpC]]''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU22030 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU22030 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU22030 DNA_with_flanks]
|-
|-
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|colspan="2" | '''Genetic context''' <br/> [[Image:ypbR_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypbR_2312529_2316110_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:dynA_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU22030]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[cell division]]}},
{{SubtiWiki category|[[cell shape]]}},
{{SubtiWiki category|[[membrane dynamics]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU22030
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mrgC.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11604]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' mediates nucleotide independent membrane fusion ''in vitro'' {{PubMed|21205012}}
* '''Protein family:''' gerABKA family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:''' two separate dynamin-like subunits and GTPase domains {{PubMed|21205012}}
* '''Modification:'''
* '''Cofactor(s):''' Mg(2+) {{PubMed|21205012}}
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** forms oligomers {{PubMed|21205012}}
** [[DynA]]-[[rny|RNase Y]] {{PubMed|23060960}}
** [[DynA]]-[[YneK]] {{PubMed|23060960}}
** [[DynA]]-[[YwpG]] {{PubMed|23060960}}
* '''[[Localization]]:'''
** associated to the membrane {{PubMed|21205012}}
** membrane, forms foci at the site of septation {{PubMed|23060960}}
** colocalizes with [[FtsZ]] {{PubMed|23249255}}
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P54159 P54159]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU22030]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''dynA'' {{PubMed|8396117}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ypbR_2312529_2316110_-1 dynA] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|8396117}}
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
== Reviews ==
<pubmed> 23109540 20970992 21599493 15040446 </pubmed>
== Original publications ==
<pubmed> 8396117 21205012 20525796 23060960 23249255 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:01, 2 April 2014