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* '''Description:''' cytochrome-c oxidase (subunit II) <br/><br/>
{{#bank: CtaC}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''ctaC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || cytochrome-c oxidase (subunit II)
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[respiration]]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14890 ctaC]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=CtaC CtaC]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 39 kDa, 8.635 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1068 bp, 356 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ctaB]]'', ''[[ctaD]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14890 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14890 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14890 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:ctaC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ctaC_1560466_1561536_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ctaC_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14890]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[respiration]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[Abh regulon]]}},
{{SubtiWiki regulon|[[AbrB regulon]]}},
{{SubtiWiki regulon|[[CcpA regulon]]}},
{{SubtiWiki regulon|[[ResD regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU14890
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ctaBCDEFG.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10215]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' 4 ferrocytochrome c + O<sub>2</sub> + 4 H<sup>+</sup> = 4 ferricytochrome c + 2 H<sub>2</sub>O (according to Swiss-Prot)
* '''Protein family:''' cytochrome c oxidase subunit 2 family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):''' Cu(A) {{PubMed|10837475}}
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[Sco]]-[[CtaC]] {{PubMed|14766920}}
** [[KinB]]-[[CtaC]]  {{PubMed|23599347}}
** part of a [[Respiratory complexes and supercomplexes|respiratory supercomplex]] {{PubMed|23880299}}
** [[CtaC]]-[[CtaE]] {{PubMed|23880299}}
* '''[[Localization]]:'''
** cell membrane {{PubMed|23880299}}
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P24011 P24011]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU14890]
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.9.3.1 1.9.3.1]
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[ctaB]]-[[ctaC]]-[[ctaD]]-[[ctaE]]-[[ctaF]]-[[ctaG]]'' {{PubMed|9829923}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ctaC_1560466_1561536_1 ctaC] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
** expressed under anaerobic conditions ([[ResD]]) {{PubMed|9829923}}
** repressed by glucose (11-fold) ([[CcpA]]) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] 
* '''Regulatory mechanism:'''
** [[ResD]]: transcription activation {{PubMed|9829923}}
** [[CcpA]]: transcription repression
** [[Abh]] and [[AbrB]]: synergistic transcription repression {{PubMed|20817675}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>,9882689,1685007,10551842,9829923,12850135,23599347 20817675 23880299 10837475</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 13:37, 2 April 2014