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* '''Description:''' thiol-disulfide oxidoreductase, with thioredoxin-like domain, required for the synthesis of the endospore peptidoglycan cortex <br/><br/>
{{#bank: StoA}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''stoA''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''spoIVH, ykvV''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || thiol-disulfide oxidoreductase
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || spore cortex formation
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13840 stoA]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=StoA StoA]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 5.297 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 495 bp, 165 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykvU]]'', ''[[zosA]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13840 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13840 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13840 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:ykvV_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=stoA_1450638_1451135_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:stoA_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13840]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[sporulation proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[SigE regulon]]}},
{{SubtiWiki regulon|[[SigG regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU13840
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ykvUV.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13324]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' reduction of intramolecular disulfide bonds in [[SpoVD]]  {{PubMed|19919673}}
* '''Protein family:''' thioredoxin domain (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** forespore envelope {{PubMed|19919673}}
=== Database entries ===
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3ERW 3ERW]
* '''UniProt:''' [http://www.uniprot.org/uniprot/O31687 O31687]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU13840]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:'''
** ''[[ykvU]]-[[stoA]]'' {{PubMed|15292147}}
** ''[[stoA]]'' {{PubMed|15292147}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=stoA_1450638_1451135_1 stoA] {{PubMed|22383849}}
* '''Sigma factor:'''
** ''[[ykvU]]'': [[SigE]] {{PubMed|12662922}}
** ''[[stoA]]'': [[SigG]] {{PubMed|15292147}}
* '''Regulation:'''
** expressed during sporulation ([[SigE]], [[SigG]]) {{PubMed|12662922,15292147}}
* '''Regulatory mechanism:'''
* '''Additional information:'''
** A [[ncRNA]] is predicted between ''[[stoA]]'' and ''[[zosA]]'' {{PubMed|20525796}}
=Biological materials =
* '''Mutant:'''
** 1S130 ( ''stoA''::''cat''), {{PubMed|15342593}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S130&Search=1S130 BGSC]
** 1S131 ( ''stoA''::''tet''), {{PubMed|15342593}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S131&Search=1S131 BGSC]
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
[[Lars Hederstedt]], University of Lund, Sweden  [http://www.cob.lu.se/microbiology/heme.html Homepage]
=Your additional remarks=
=References=
==Reviews==
<pubmed> 19919674 </pubmed>
==Original Publications==
<pubmed>,12662922,15292147,15342593, 19144642 19919673 20525796</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 13:33, 2 April 2014