Jump to content

HisB: Difference between revisions

From SubtiWiki
No edit summary
No edit summary
Line 37: Line 37:
<br/><br/><br/><br/>
<br/><br/><br/><br/>
<br/><br/><br/><br/>
<br/><br/><br/><br/>
<br/><br/><br/><br/>
<br/><br/>
<br/><br/><br/><br/>
 
 
<br/><br/><br/><br/><br/><br/>


= [[Categories]] containing this gene/protein =
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis/ acquisition of amino acids]]}}
{{SubtiWiki category|[[biosynthesis/ acquisition of amino acids]]}},
[[most abundant proteins]]


= This gene is a member of the following [[regulons]] =
= This gene is a member of the following [[regulons]] =
Line 64: Line 61:


=== Additional information===
=== Additional information===


=The protein=
=The protein=
Line 82: Line 76:
* '''Kinetic information:'''
* '''Kinetic information:'''


* '''Domains:'''  
* '''[[Domains]]:'''  


* '''Modification:'''
* '''Modification:'''


* '''Cofactor(s):'''
* '''[[Cofactors]]:'''


* '''Effectors of protein activity:'''
* '''Effectors of protein activity:'''
Line 112: Line 106:
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=hisB_3585690_3586274_-1 hisB] {{PubMed|22383849}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=hisB_3585690_3586274_-1 hisB] {{PubMed|22383849}}


* '''Sigma factor:'''  
* '''[[Sigma factor]]:'''  


* '''Regulation:''' repressed by casamino acids {{PubMed|12107147}}
* '''Regulation:''' repressed by casamino acids {{PubMed|12107147}}
Line 119: Line 113:


* '''Additional information:'''
* '''Additional information:'''
** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}


=Biological materials =
=Biological materials =
Line 140: Line 135:
=References=
=References=


<pubmed>12107147, </pubmed>
<pubmed>12107147, 15378759</pubmed>


[[Category:Protein-coding genes]]
[[Category:Protein-coding genes]]

Revision as of 16:01, 5 March 2014

  • Description: imidazoleglycerol-phosphate dehydratase

Gene name hisB
Synonyms
Essential no
Product imidazoleglycerol-phosphate dehydratase
Function biosynthesis of histidine
Gene expression levels in SubtiExpress: hisB
Metabolic function and regulation of this protein in SubtiPathways:
hisB
MW, pI 21 kDa, 5.598
Gene length, protein length 582 bp, 194 aa
Immediate neighbours hisH, hisD
Sequences Protein DNA DNA_with_flanks
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed
File:HisB expression.png















Categories containing this gene/protein

biosynthesis/ acquisition of amino acids, most abundant proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU34900

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O (according to Swiss-Prot)
  • Protein family: imidazoleglycerol-phosphate dehydratase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure: 2AE8 (from Staphylococcus aureus subsp. aureus n315 mutant, 48% identity, 65% similarity)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Regulation: repressed by casamino acids PubMed
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

<pubmed>12107147, 15378759</pubmed>