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PbpH: Difference between revisions

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* '''Description:''' class B [[penicillin-binding protein]] H <br/><br/>
* '''Description:''' class B [[penicillin-binding protein]] H, required for [[cell wall synthesis]] during cell elongation <br/><br/>


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* '''Catalyzed reaction/ biological activity:'''  
* '''Catalyzed reaction/ biological activity:'''  
** required for [[cell wall synthesis]] during cell elongation {{PubMed|12896990}}
** driver of [[MreB]] dynamics {{PubMed|21636744,21636745}}


* '''Protein family:''' transpeptidase family (according to Swiss-Prot)
* '''Protein family:''' transpeptidase family (according to Swiss-Prot)
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* '''[[SubtInteract|Interactions]]:'''  
* '''[[SubtInteract|Interactions]]:'''  
** part of the [[cell wall biosynthetic complex]] {{PubMed|21636744,21636745}}
** part of the [[elongasome]] {{PubMed|21636744,21636745}}


* '''[[Localization]]:'''  
* '''[[Localization]]:'''  
** cell membrane (according to Swiss-Prot)
** cell membrane (according to Swiss-Prot)
** localization depends on the availability of peptidoglyan precursors (lipid II) {{PubMed|23895585}}


=== Database entries ===
=== Database entries ===

Revision as of 09:24, 5 March 2014

Gene name pbpH
Synonyms ykuA
Essential no
Product penicillin-binding protein H
Function formation of a rod-shaped peptidoglycan cell wall
Gene expression levels in SubtiExpress: pbpH
MW, pI 76 kDa, 8.888
Gene length, protein length 2055 bp, 685 aa
Immediate neighbours ykwD, kinA
Sequences Protein DNA DNA_with_flanks
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed















Categories containing this gene/protein

cell wall synthesis, membrane proteins

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

  • Locus tag: BSU13980

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Protein family: transpeptidase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:
  • Localization:
    • cell membrane (according to Swiss-Prot)
    • localization depends on the availability of peptidoglyan precursors (lipid II) PubMed

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

<pubmed> 12896990 20525796 21636744,21636745 20817675 23199363 23895585 </pubmed>