PdaA: Difference between revisions
No edit summary |
|||
| Line 1: | Line 1: | ||
* '''Description:''' | * '''Description:''' N-acetylmuramic acid deacetylase, spore cortex peptidoglycan synthesis<br/><br/> | ||
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
|- | |- | ||
| Line 9: | Line 9: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || | |style="background:#ABCDEF;" align="center"| '''Product''' || N-acetylmuramic acid deacetylase | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || | |style="background:#ABCDEF;" align="center"|'''Function''' || spore cortex peptidoglycan synthesis | ||
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07980 pdaA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07980 pdaA] | ||
| Line 34: | Line 34: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/> | <br/><br/> | ||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
{{SubtiWiki category|[[ | {{SubtiWiki category|[[cell wall/ other]]}}, | ||
{{SubtiWiki category|[[sporulation proteins]]}} | |||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
Revision as of 18:33, 12 January 2014
- Description: N-acetylmuramic acid deacetylase, spore cortex peptidoglycan synthesis
| Gene name | pdaA |
| Synonyms | yfjS |
| Essential | no |
| Product | N-acetylmuramic acid deacetylase |
| Function | spore cortex peptidoglycan synthesis |
| Gene expression levels in SubtiExpress: pdaA | |
| MW, pI | 29 kDa, 7.318 |
| Gene length, protein length | 789 bp, 263 aa |
| Immediate neighbours | yfjT, yfjR |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Categories containing this gene/protein
cell wall/ other, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU07980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: polysaccharide deacetylase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1W17
- UniProt: O34928
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: pdaA PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
<pubmed>12374835,15687192,15699190,15251431 14679227 24405365</pubmed>