Jump to content

CotS: Difference between revisions

From SubtiWiki
No edit summary
Line 59: Line 59:


=== Additional information===
=== Additional information===


=The protein=
=The protein=
Line 77: Line 74:
* '''Kinetic information:'''
* '''Kinetic information:'''


* '''Domains:'''  
* '''[[Domains]]:'''  


* '''Modification:'''
* '''Modification:'''


* '''Cofactor(s):'''
* '''[[Cofactors]]:'''


* '''Effectors of protein activity:'''
* '''Effectors of protein activity:'''
Line 107: Line 104:
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotS_3159691_3160746_-1 cotS] {{PubMed|22383849}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotS_3159691_3160746_-1 cotS] {{PubMed|22383849}}


* '''Sigma factor:''' [[SigK]] {{PubMed|15699190,9603889}}
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,9603889}}


* '''Regulation:'''  
* '''Regulation:'''  
Line 136: Line 133:


=References=
=References=
 
== Reviews ==
<pubmed>23202530</pubmed>
== Original publications ==
<pubmed>11737650,7545510,9603889,14702409,10234840,15699190,22171814, 15383836</pubmed>
<pubmed>11737650,7545510,9603889,14702409,10234840,15699190,22171814, 15383836</pubmed>


[[Category:Protein-coding genes]]
[[Category:Protein-coding genes]]

Revision as of 19:02, 4 January 2014

  • Description: outer spore coat protein

Gene name cotS
Synonyms
Essential no
Product spore coat protein
Function resistance of the spore
Gene expression levels in SubtiExpress: cotS
MW, pI 40 kDa, 6.641
Gene length, protein length 1053 bp, 351 aa
Immediate neighbours ytxO, cotSA
Sequences Protein DNA DNA_with_flanks
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigK regulon, GerE regulon

The gene

Basic information

  • Locus tag: BSU30900

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: cotS family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK, GerE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

<pubmed>23202530</pubmed>

Original publications

<pubmed>11737650,7545510,9603889,14702409,10234840,15699190,22171814, 15383836</pubmed>