LipC: Difference between revisions
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* '''Kinetic information:''' | * '''Kinetic information:''' | ||
* '''Domains:''' | * '''[[Domains]]:''' | ||
* '''Modification:''' | * '''Modification:''' | ||
* ''' | * '''[[Cofactors]]:''' | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=lipC_462431_463072_1 lipC] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=lipC_462431_463072_1 lipC] {{PubMed|22383849}} | ||
* '''Sigma factor:''' | * '''[[Sigma factor]]:''' | ||
** ''lipC'': [[SigK]] {{PubMed|15699190,17220230}} | ** ''lipC'': [[SigK]] {{PubMed|15699190,17220230}} | ||
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=References= | =References= | ||
== Reviews == | |||
<pubmed>23202530</pubmed> | |||
== Original publications == | |||
<pubmed> 17220230 9334321 20057119 22171814</pubmed> | <pubmed> 17220230 9334321 20057119 22171814</pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:22, 4 January 2014
- Description: spore coat protein, phospholipase implicated in spore germination
| Gene name | lipC |
| Synonyms | ycsK |
| Essential | no |
| Product | spore coat phospholipase B |
| Function | spore germination |
| Gene expression levels in SubtiExpress: lipC | |
| Function and regulation of this protein in SubtiPathways: Phosphorelay | |
| MW, pI | 23 kDa, 5.839 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | kipR, yczI |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Categories containing this gene/protein
utilization of lipids, sporulation proteins, germination
This gene is a member of the following regulons
KipR regulon, SigK regulon, TnrA regulon, GerE regulon
The gene
Basic information
- Locus tag: BSU04110
Phenotypes of a mutant
- defective in L-alanine-stimulated germination PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: cleaves the fatty acids at the sn-1 and sn-2 positions of phospholipids PubMed
- Protein family: 'GDSL' lipolytic enzyme family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P42969
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
<pubmed>23202530</pubmed>
Original publications
<pubmed> 17220230 9334321 20057119 22171814</pubmed>