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CotT: Difference between revisions

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= This gene is a member of the following [[regulons]] =
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[SigK regulon]]}}
{{SubtiWiki regulon|[[SigK regulon]]}},
{{SubtiWiki regulon|[[GerE regulon]]}},
{{SubtiWiki regulon|[[SigE regulon]]}},
{{SubtiWiki regulon|[[SpoIIID regulon]]}}
 


=The gene=
=The gene=
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* '''[[Localization]]:'''
* '''[[Localization]]:'''
** inner spore coat  {{PubMed|19933362}}
** inner spore coat, localization depends on [[SafA]] {{PubMed|22171814,19933362}}


=== Database entries ===
=== Database entries ===
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotT_1280626_1280949_-1 cotT] {{PubMed|22383849}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotT_1280626_1280949_-1 cotT] {{PubMed|22383849}}


* '''Sigma factor:''' [[SigK]] {{PubMed|2546006,15699190,15383836}}
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|2546006,15699190,15383836}}, [[SigE]] {{PubMed|15383836}}


* '''Regulation:'''  
* '''Regulation:'''  
** expressed late during sporulation in the mother cell ([[SigK]]) {{PubMed|2546006,15699190,15383836}}
** expressed during sporulation in the mother cell ([[SigE]], [SigK]], [[GerE]], [[SpoIIID]]) {{PubMed|2546006,15699190,15383836}}


* '''Regulatory mechanism:'''  
* '''Regulatory mechanism:'''  
** [[SpoIIID]]: transcription activation {{PubMed|15383836}}
** [[SpoIIID]]: transcription activation {{PubMed|15383836}}
** [[GerE]]: transcription repression {{PubMed|15383836}}


* '''Additional information:'''
* '''Additional information:'''
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=References=
=References=


<pubmed>10714992,1917883,2546006,15699190, 15383836 19933362 </pubmed>
<pubmed>10714992,1917883,2546006,15699190, 15383836 19933362 22171814 </pubmed>


[[Category:Protein-coding genes]]
[[Category:Protein-coding genes]]

Revision as of 16:06, 13 August 2013

  • Description: spore coat protein (inner)

Gene name cotT
Synonyms
Essential no
Product spore coat protein (inner)
Function resistance of the spore
Gene expression levels in SubtiExpress: cotT
MW, pI 12 kDa, 9.466
Gene length, protein length 321 bp, 107 aa
Immediate neighbours ctaO, pdaC
Sequences Protein DNA DNA_with_flanks
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed















Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigK regulon, GerE regulon, SigE regulon, SpoIIID regulon


The gene

Basic information

  • Locus tag: BSU12090

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Arthur Aronson, Purdue University, West Lafayette, USA homepage

Your additional remarks

References

<pubmed>10714992,1917883,2546006,15699190, 15383836 19933362 22171814 </pubmed>