Jump to content

TrpP: Difference between revisions

From SubtiWiki
No edit summary
No edit summary
Line 90: Line 90:


* '''[[SubtInteract|Interactions]]:'''  
* '''[[SubtInteract|Interactions]]:'''  
** [[YbaF]]-[[TrpP]] {{PubMed|20497229}}


* '''[[Localization]]:'''
* '''[[Localization]]:'''
Line 141: Line 142:


=References=
=References=
 
==Reviews==
<pubmed> 20497229 </pubmed>
==Original publications==
<pubmed>10735881,14702295 , </pubmed>
<pubmed>10735881,14702295 , </pubmed>


[[Category:Protein-coding genes]]
[[Category:Protein-coding genes]]

Revision as of 19:26, 13 July 2013

Gene name trpP
Synonyms yhaG
Essential no
Product S protein of tryptophan ECF transporter
Function tryptophan uptake
Gene expression levels in SubtiExpress: trpP
Metabolic function and regulation of this protein in SubtiPathways:
Phe, Tyr, Trp
MW, pI 18 kDa, 11.155
Gene length, protein length 516 bp, 172 aa
Immediate neighbours yhzF, serC
Sequences Protein DNA DNA_with_flanks
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed















Categories containing this gene/protein

ECF transporter, biosynthesis/ acquisition of amino acids, membrane proteins

This gene is a member of the following regulons

TRAP regulon

The gene

Basic information

  • Locus tag: BSU10010

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: trpP transporter family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced in the absence of tryptophan (MtrB) PubMed
  • Regulatory mechanism:
    • MtrB: translation inhibition at an RNA switch, the MtrB binding site overlaps the Shine-DAlgarno sequence and translation initation region, MtrB binds in the presence of tryptophan PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

<pubmed> 20497229 </pubmed>

Original publications

<pubmed>10735881,14702295 , </pubmed>