BacD: Difference between revisions
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bacE]]'', ''[[bacC]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bacE]]'', ''[[bacC]]'' | ||
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37710 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37710 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37710 | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU37710 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU37710 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU37710 DNA_with_flanks] | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:ywfE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ywfE_context.gif]] | ||
Revision as of 11:33, 14 May 2013
- Description: alanine-anticapsin ligase
| Gene name | bacD |
| Synonyms | ywfE, ipa-83d |
| Essential | no |
| Product | alanine-anticapsin ligase |
| Function | biosynthesis of the antibiotic bacilysin |
| Gene expression levels in SubtiExpress: bacD | |
| MW, pI | 52 kDa, 4.679 |
| Gene length, protein length | 1416 bp, 472 aa |
| Immediate neighbours | bacE, bacC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Categories containing this gene/protein
miscellaneous metabolic pathways, biosynthesis of antibacterial compounds
This gene is a member of the following regulons
AbrB regulon, CodY regulon, ScoC regulon
The gene
Basic information
- Locus tag: BSU37710
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- ligation of anticapsin to L-Ala to form bacilysin, ultimate step in bacilysin biosynthesis PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- UniProt: P39641
- KEGG entry: [2]
- E.C. number: 6.3.2.28
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed <pubmed>16030213,12372825,19352016,19801406 21948839 22407814 </pubmed>