Jump to content

SpoVIF: Difference between revisions

From SubtiWiki
Raphael2215 (talk | contribs)
No edit summary
Awiechert (talk | contribs)
No edit summary
Line 19: Line 19:
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 300 bp, 100 aa  
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 300 bp, 100 aa  
|-
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjcA]]'', ''[[yjcD]]''
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjcZ]]'', ''[[yjcD]]''
|-
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13038&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13038&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''

Revision as of 09:21, 30 November 2012

  • Description: required for spore coat assembly and resistance

Gene name spoVIF
Synonyms yjcC
Essential no
Product unknown
Function required for spore coat assembly and resistance
Gene expression levels in SubtiExpress: spoVIF
MW, pI 11 kDa, 10.201
Gene length, protein length 300 bp, 100 aa
Immediate neighbours yjcZ, yjcD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

GerR regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU11810

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK, GerR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

<pubmed>14523132,20435725 , </pubmed>