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* '''Description:''' bacterial hydrophobin, forms water-repellent surface layer of the biofilm, inhibitor of [[KinA]] autophosphorylation, and subsequently of entry into [[sporulation]] <br/><br/>
{{#bank: BslA}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''bslA''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yuaB, sivB ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || biofilm surface layer, inhibitor of [[KinA]] autophosphorylation
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || [[biofilm formation]], control of entry into [[sporulation]] via the [[phosphorelay]]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU31080/ bslA]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 9.987 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 543 bp, 181 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[gbsR]]'', ''[[ktrA]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31080 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31080 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31080 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yuaB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yuaB_3187503_3188048_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:yuaB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU31080]]
|-
|}
__TOC__
<br/><br/><br/><br/>
<br/><br/><br/><br/>
<br/><br/><br/><br/>
<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biofilm formation]]}},
{{SubtiWiki category|[[phosphorelay]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[AbrB regulon]]}},
{{SubtiWiki regulon|[[DegU regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU31080
===Phenotypes of a mutant ===
* reduced colony complexity {{PubMed|21742882}}
* loss of surface repellency of the biofilm {{PubMed|22571672}}
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU31080&redirect=T BSU31080]
* '''DBTBS entry:''' no entry
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12341]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
** inhibits [[KinA]] autophophorylation {{PubMed|23335417}}
* '''Protein family:'''
* '''Paralogous protein(s):''' [[SivA]]
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
** extracellular (signal peptide) [http://www.ncbi.nlm.nih.gov/pubmed/18957862 PubMed]
** biofilm matrix in an extracellular polysaccharide-dependent manner {{PubMed|22571672}}
** forms a layer on the biofilm surface {{PubMed|22571672}}
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU31080&redirect=T BSU31080]
* '''Structure:'''
** [http://www.rcsb.org/pdb/explore.do?structureId=4BHU 4BHU] {{PubMed|23904481}}
* '''UniProt:''' [http://www.uniprot.org/uniprot/P71014 P71014]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU31080]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[bslA]]'' {{PubMed|22383849}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yuaB_3187503_3188048_1 yuaB] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
** [[AbrB]]: transcription repression {{PubMed|18978066}}
** [[LutR]]: transcription activation {{PubMed|24196425}}
** expression is down-regulated in a ''[[rok]]'' mutant (indirect effect) {{PubMed|21097620}}
** [[DegU]]-P: transcription activation {{PubMed|18978066}}, this might be indirect {{PubMed|21742882}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
** ''B. subtilis'' W939 ''bslA''::Cm (ATCC6051 based) {{PubMed|17850253}}
** ''B. subtilis'' NRS2097 ''bslA''::Cm (NCIB3610 based) {{PubMed|18978066}}
** ''B. subtilis'' ''bslA''::Cm (168 based) {{PubMed|21097620}}
* '''Expression vector:'''
** Physpank-bslA based on vector pDR111: pDRyuaB2 {{PubMed|21097620}}
       
* '''lacZ fusion:'''
** pNW500 P''bslA-lacZ'' fusion in pDG1663 {{PubMed|18978066}}
* '''GFP fusion:'''
** P''bslA-gfp'' fusion in pSG1151 vector: pSGyuaB {{PubMed|21097620}}
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed> 22607588 23979433 24988880 25907113</pubmed>
==Original publications==
<pubmed> 22571672 18978066 18957862 17850253 21097620 21742882 22383849 23335417 23904481 22571672 25870300 26152584</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 11:21, 23 July 2015