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* '''Description:''' [[Protein kinases and phosphatases|protein serine phosphatase]], septum-associated PP2C, dephosphorylation of [[SpoIIAA]] <br/><br/>
{{#bank: SpoIIE}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''spoIIE''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''spoIIH, spoIIK ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || [[Protein kinases and phosphatases|protein serine phosphatase]], septum-associated PP2C
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigF]] activity <br/>required for normal formation of the asymmetric septum
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00640 spoIIE]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=SpoIIE SpoIIE]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=spoIIE spoIIE]'''
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 91 kDa, 6.137 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 2481 bp, 827 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnSL-Glu1]]'', ''[[yabS]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00640 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00640 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00640 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIIE_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIE_70538_73021_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:spoIIE_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00640]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[protein modification]]}},
{{SubtiWiki category|[[sigma factors and their control]]}},
{{SubtiWiki category|[[membrane proteins]]}},
{{SubtiWiki category|[[sporulation proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[Spo0A regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU00640
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00640&redirect=T BSU00640]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/spoIIE.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10127]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''  dephosphorylation of [[SpoIIAA]]
* '''Protein family:''' PP2C [[Protein kinases and phosphatases|phosphatase]]
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[SpoIIE]]-[[FtsZ]]
** [[SpoIIE]]-[[SpoIIAB]]
** [[SpoIIE]]-[[SpoIIE]]
** [[SpoIIQ]]-[[SpoIIE]]
** forms a dimer  {{PubMed|22115775}}
* '''[[Localization]]:'''
** cell membrane (according to Swiss-Prot)
** localizes to the polar cell division sites where it causes [[FtsZ]] to relocate from mid-cell to form polar Z-rings
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU00640&redirect=T BSU00640]
* '''Structure:'''
** [http://www.rcsb.org/pdb/explore.do?structureId=3T91 3T91] (phosphatase domain) {{PubMed|22115775}}
* '''UniProt:''' [http://www.uniprot.org/uniprot/P37475 P37475]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU00640]
* '''E.C. number:''' [http://www.expasy.org/enzyme/3.1.3.16 3.1.3.16]
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''spoIIE'' (DBTBS)
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spoIIE_70538_73021_1 spoIIE] {{PubMed|22383849}}
* '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/1556084 PubMed]
* '''Regulation:'''
** expressed under conditions that trigger sporulation ([[Spo0A]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/1556084,15687200 PubMed]
* '''Regulatory mechanism:'''
** [[Spo0A]]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/1556084,15687200 PubMed]
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
[[Imrich Barak]], Slovak Academy of Science, Bratislava, Slovakia [http://imb.savba.sk/~barak/ homepage]
=Your additional remarks=
=References=
==Modeling of [[SigF]] activation==
<pubmed> 24067622 22312331</pubmed>
==Original Publications==
<pubmed>7570023,7570022,12180929,9077448,9364910,10323866,8622920,12007411,16824103,10476035,10747015,10322028,15978076,9495766,14744853,9642177,15866939,8846916,1556084,1948031,9573053,18077456,11846550,9150232,15205443,1556084,15687200, 19578359 10049355 20817757 22115775</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 09:04, 11 August 2014