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MoaD: Difference between revisions

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* '''Description:''' molybdopterin synthase (small subunit) <br/><br/>
{{#bank: MoaD}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''moaD''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || molybdopterin synthase (small subunit)
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|style="background:#ABCDEF;" align="center"|'''Function''' || nitrate respiration
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14310 moaD]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=MoaD MoaD]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 3.829 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 231 bp, 77 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[moaE]]'', ''[[yknU]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU14310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU14310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU14310 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:moaD_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=moaD_1499432_1499665_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:moaD_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU14310]]
|-
|}
__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis of cofactors]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU14310
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU14310&redirect=T BSU14310]
* '''DBTBS entry:''' no entry
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12619]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''[[Domains]]:'''
* '''Modification:'''
* '''[[Cofactors]]:'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[MoaD]]-[[MoaE]] (as deduced from ''E. coli'', {{PubMed|12571227}})
* '''[[Localization]]:'''
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU14310&redirect=T BSU14310]
* '''Structure:'''
** [http://www.rcsb.org/pdb/explore/explore.do?structureId=1NVI 1NVI] (the [[MoaD]]-[[MoaE]] complex from ''E. coli'')  {{PubMed|12571227}}
* '''UniProt:''' [http://www.uniprot.org/uniprot/O31706 O31706]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU14310]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[mobA]]-[[moeB]]-[[moeA]]-[[mobB]]-[[moaE]]-[[moaD]]'' {{PubMed|22383849}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=moaD_1499432_1499665_1 moaD] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
== Reviews ==
<pubmed> 22616866  23539623 </pubmed>
== Original publications ==
<pubmed> 12571227 22383849</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 11:49, 8 April 2014