PdaA

• Description: polysaccharide deacetylase, required for germination
  
  

Gene name	pdaA
Synonyms	yfjS
Essential	no
Product	polysaccharide deacetylase
Function	germination
Gene expression levels in SubtiExpress: pdaA
MW, pI	29 kDa, 7.318
Gene length, protein length	789 bp, 263 aa
Immediate neighbours	yfjT, yfjR
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

germination

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

• Locus tag: BSU07980

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: polysaccharide deacetylase family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure: 1W17

• UniProt: O34928

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: pdaA PubMed

• Expression browser: pdaA PubMed

• Sigma factor: SigG PubMed

• Regulation: expressed late during sporulation in the forespore (SigG) PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

<pubmed>12374835,15687192,15699190,15251431 14679227 24405365</pubmed>