RplW: Difference between revisions
No edit summary |
No edit summary |
||
| Line 39: | Line 39: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/> | |||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| Line 112: | Line 112: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplW_136992_137279_1 rplW] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplW_136992_137279_1 rplW] {{PubMed|22383849}} | ||
* '''Sigma factor:''' | * '''[[Sigma factor]]:''' | ||
** [[SigA]] two promoters, about 140bp and 200bp upstream of the start codon {{PubMed|9371452}} | ** [[SigA]] two promoters, about 140bp and 200bp upstream of the start codon {{PubMed|9371452}} | ||
| Line 141: | Line 141: | ||
=References= | =References= | ||
<pubmed>18763711, 19653700 9371452 11948165 8635744 22517742 23002217</pubmed> | |||
<pubmed>18763711, 19653700 9371452 11948165 8635744 22517742</pubmed> | |||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:26, 19 June 2013
- Description: ribosomal protein
| Gene name | rplW |
| Synonyms | |
| Essential | no PubMed |
| Product | ribosomal protein L23 |
| Function | translation |
| Gene expression levels in SubtiExpress: rplW | |
| Interactions involving this protein in SubtInteract: RplW | |
| MW, pI | 10 kDa, 10.087 |
| Gene length, protein length | 285 bp, 95 aa |
| Immediate neighbours | rplD, rplB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Categories containing this gene/protein
translation, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU01180
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ribosomal protein L23P family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- phosphorylated on Arg-10 PubMed
- Cofactor(s):
- Effectors of protein activity:
- Localization: membrane associated PubMed
Database entries
- Structure:
- UniProt: P42924
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon: rpsJ-rplC-rplD-rplW-rplB-rpsS-rplV-rpsC-rplP-rpmC-rpsQ-rplN-rplX-rplE-rpsN-rpsH-rplF-rplR-rpsE-rpmD-rplO PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
<pubmed>18763711, 19653700 9371452 11948165 8635744 22517742 23002217</pubmed>