Jump to content

YvaM: Difference between revisions

From SubtiWiki
No edit summary
No edit summary
Line 22: Line 22:
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[secG]]'', ''[[yvzC]]''
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[secG]]'', ''[[yvzC]]''
|-
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33640 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33640 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33640 Advanced_DNA]
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU33640 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU33640 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU33640 DNA_with_flanks]
|-
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yvaM_context.gif]]
|colspan="2" | '''Genetic context''' <br/> [[Image:yvaM_context.gif]]

Revision as of 11:16, 14 May 2013

  • Description: similar to hydrolase

Gene name yvaM
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yvaM
MW, pI 29 kDa, 8.995
Gene length, protein length 768 bp, 256 aa
Immediate neighbours secG, yvzC
Sequences Protein DNA DNA_with_flanks
Genetic context
This image was kindly provided by SubtiList
Expression at a glance   PubMed
























Categories containing this gene/protein

poorly characterized/ putative enzymes, sporulation proteins

This gene is a member of the following regulons

RghR regulon

The gene

Basic information

  • Locus tag: BSU33640

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: AB hydrolase superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yvaM (according to DBTBS)
  • Sigma factor:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

<pubmed>16553878, </pubmed>