Jump to content

Int: Difference between revisions

From SubtiWiki
m Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk
No edit summary
Line 98: Line 98:
* '''Operon:'''  
* '''Operon:'''  


* '''[[Sigma factor]]:'''  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydcL_529505_530611_-1 int] {{PubMed|22383849}}
 
* '''Sigma factor:'''  


* '''Regulation:'''  
* '''Regulation:'''  
Line 104: Line 106:
* '''Regulatory mechanism:'''  
* '''Regulatory mechanism:'''  


* '''Additional information:'''  
* '''Additional information:'''


=Biological materials =
=Biological materials =

Revision as of 15:53, 7 August 2012

  • Description: integrase

Gene name int
Synonyms ydcL
Essential no
Product integrase
Function excision of the conjugative transposon
ICEBs1 from the trnS-leu2 locus
MW, pI 43 kDa, 9.764
Gene length, protein length 1104 bp, 368 aa
Immediate neighbours trnS-Leu2, immA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
This image was kindly provided by SubtiList




Categories containing this gene/protein

mobile genetic elements

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04800

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: 'phage' integrase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

<pubmed>18005101,, </pubmed>