WalK: Difference between revisions
Appearance
No edit summary |
No edit summary |
||
| Line 26: | Line 26: | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yycG_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yycG_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
|- | |||
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=walK_4151853_4153688_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:walK_expression.png|500px]] | |||
|- | |- | ||
|} | |} | ||
__TOC__ | __TOC__ | ||
<br/><br/><br/><br/> | |||
<br/><br/><br/><br/> | |||
<br/><br/><br/><br/> | |||
<br/><br/><br/><br/> | |||
<br/><br/><br/><br/> | |||
<br/><br/> | <br/><br/> | ||
Revision as of 13:02, 23 April 2012
- Description: two-component sensor kinase, controls cell wall metabolism, co-ordinates cell wall remodelling with cell division by controlling the transcription of genes for autolysins and their inhibitors
| Gene name | walK |
| Synonyms | yycG |
| Essential | yes PubMed |
| Product | two-component sensor kinase (OmpR family) |
| Function | control of cell wall metabolism |
| Interactions involving this protein in SubtInteract: WalK | |
| MW, pI | 69 kDa, 4.775 |
| Gene length, protein length | 1833 bp, 611 aa |
| Immediate neighbours | yycH, walR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context
This image was kindly provided by SubtiList
| |
| Expression at a glance PubMed | |
Categories containing this gene/protein
cell wall/ other, protein modification, transcription factors and their control, essential genes, membrane proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU40400
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: autophosphorylation, phosphorylation of WalR
- Protein family: two-component sensor kinase of the OmpR family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: two transmembrane segments, C-terminal histidine phosphotransferase domain
- Modification: autophosphorylation on a His residue
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q45614
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation: expressed during vegetative growth, repressed during stationary phase PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
<pubmed>19019149,18792692,10094672, 18245295 </pubmed>
Original Publications
<pubmed>18573169,17350627,17827301,9829949,17581128,10878122,16030236,12950927,18408157, 19342776 20057515 20059685 20167622 21219466 </pubmed>
