Easter egg: Difference between revisions

Revision as of 13:23, 9 November 2010

Biofilms are the result of the multicellular lifestyle of B. subtilis. They are characterized by the formation of a matrix polysaccharide and an amyloid-like protein, TasA.

Parent categories	sinR
Neighboring categories	sin, flaD
Related categories	no

Biofilm formation in SubtiPathways

Labs working on biofilm formation

Key genes and operons involved in biofilm formation

matrix polysaccharide synthesis:
- epsA-epsB-epsC-epsD-epsE-epsF-epsG-epsH-epsI-epsJ-epsK-epsL-epsM-epsN-epsO
amyloid protein synthesis
- yqxM-sipW-tasA
regulation
- SlrR
- SlrA
- SinR
- SinI
- PtkA
- TkmA
- PtpZ
- DegU
- RacX
biofilm disassembly
- YlmE
other proteins required for biofilm formation
- SpeA
- YmcA
- YxaB

Key reviews

additional reviews: PubMed

@@ Line 3: / Line 3: @@
 {| align="right" border="1" cellpadding="2"
 |-
-|style="background:#ABCDEF;" align="center"|'''Gene name'''
+|style="background:#ABCDEF;" align="center"|'''Parent categories'''
 |''sinR''
 |-
-|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''sin, flaD ''
+|style="background:#ABCDEF;" align="center"| '''Neighboring categories''' || ''sin, flaD ''
-|-
-|style="background:#ABCDEF;" align="center"| '''Essential''' || no
-|-
-|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional regulator of post-exponential-phase responses genes
-|-
-|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[biofilm formation]]
-|-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm], [http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]'''
-|-
-|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 12 kDa, 7.177
-|-
-|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 333 bp, 111 aa
-|-
-|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sinI]]'', ''[[tasA]]''
-|-
-|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14392&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
-|-
-|colspan="2" | '''Genetic context''' <br/> [[Image:sinR_context.gif]]
- <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
+|style="background:#ABCDEF;" align="center"| '''Related categories''' || no
 |}