EpsM: Difference between revisions
Appearance
No edit summary |
|||
| Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
* '''Operon:''' ''[[epsA]]-[[epsB]]-[[epsC]]-[[epsD]]-[[epsE]]-[[epsF]]-[[epsG]]-[[epsH]]-[[epsI]]-[[epsJ]]-[[epsK]]-[[epsL]]-[[epsM]]-[[epsN]]-[[epsO]]'' {{PubMed|15661000}} | |||
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|15661000}} | |||
* '''[[Sigma factor]]:''' [[SigA]] | |||
* '''Regulation:''' | * '''Regulation:''' | ||
** repressed by [[SinR]] | ** repressed by [[SinR]] {{PubMed|15661000}} | ||
* '''Regulatory mechanism:''' [[SinR]]: transcription repression | * '''Regulatory mechanism:''' | ||
** [[ | ** [[SinR]]: transcription repression {{PubMed|15661000}} | ||
** [[SlrR]]: transcription activation {{PubMed|18647168}} | |||
* '''Additional information:''' induction by sequestration of [[SinR]] by [[SinI]] [ | * '''Additional information:''' | ||
** induction by sequestration of [[SinR]] by [[SinI]] {{PubMed|15661000}} | |||
** activation by [[SlrR]] requires prior formation of the [[SlrR]]-[[SlrA]] complex {{PubMed|18647168}} | |||
=Biological materials = | =Biological materials = | ||
Revision as of 09:20, 30 December 2009
- Description: similar to serine O-acetyltransferase, extracellular polysaccharide synthesis
| Gene name | epsM |
| Synonyms | yvfD |
| Essential | no |
| Product | unknown |
| Function | extracellular polysaccharide synthesis |
| MW, pI | 22 kDa, 9.427 |
| Gene length, protein length | 648 bp, 216 aa |
| Immediate neighbours | epsN, epsL |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context
This image was kindly provided by SubtiList
| |
The gene
Basic information
- Locus tag: BSU34240
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: transferase hexapeptide repeat family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P71063
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Richard Losick, Harvard Univ., Cambridge, USA homepage
Your additional remarks
References
<pubmed>15661000,16430695,18047568,15661000</pubmed>
