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WalK: Difference between revisions

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* '''Description:''' two-component sensor kinase, controls cell wall metabolism <br/><br/>
{{#bank: WalK}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''walK''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yycG''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || two-component sensor kinase (OmpR family)
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || control of cell wall metabolism
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 69 kDa, 4.775 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1833 bp, 611 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yycH]]'', ''[[walR]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB16077&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yycG_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}
__TOC__
<br/><br/>
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU40400
===Phenotypes of a mutant ===
essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yycFGHIJ-yyxA.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11461]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' ATP + protein L-histidine = ADP + protein N-phospho-L-histidine (according to Swiss-Prot)
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:''' two transmembrane segments, C-terminal histidine phosphotransferase domain
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''Interactions:''' [[WalK]]-[[WalR]]
* '''Localization:''' cell membrane (according to Swiss-Prot), part of the division septum in growing cells [http://www.ncbi.nlm.nih.gov/sites/entrez/18573169 PubMed]
=== Database entries ===
* '''Structure:'''
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/Q45614 Q45614]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU40400]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[walR]]-[[walK]]-[[yycH]]-[[yycI]]-[[yycJ]]-[[yyxA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/9829949 PubMed]
* '''[[Sigma factor]]:'''
* '''Regulation:''' expressed during vegetative growth, repressed during stationary phase [http://www.ncbi.nlm.nih.gov/sites/entrez/9829949 PubMed]
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>19019149,18573169,17350627,18792692,10094672,17827301,9829949,17581128,10878122,16030236,12950927,18408157,19342776,, 19342776 </pubmed>

Latest revision as of 16:08, 27 October 2014