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| * '''Description:''' two-component response regulator, controls cell wall metabolism <br/><br/>
| | {{#bank: WalR}} |
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| {| align="right" border="1" cellpadding="2"
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| |style="background:#ABCDEF;" align="center"|'''Gene name'''
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| |''walR''
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| |-
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| |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yycF''
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| |style="background:#ABCDEF;" align="center"| '''Essential''' || yes [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
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| |style="background:#ABCDEF;" align="center"| '''Product''' || two-component response regulator
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| |style="background:#ABCDEF;" align="center"|'''Function''' || control of cell wall metabolism
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| |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.876
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| |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 705 bp, 235 aa
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| |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[walK]]'', ''[[trnY-Phe]]''
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| |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB16078]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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| |colspan="2" | '''Genetic context''' <br/> [[Image:yycF_context.gif]]
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| <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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| |}
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| __TOC__
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| <br/><br/>
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| =The gene=
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| === Basic information ===
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| * '''Locus tag:''' BSU40410
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| ===Phenotypes of a mutant ===
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| essential [http://www.ncbi.nlm.nih.gov/pubmed/12682299 PubMed]
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| === Database entries ===
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| * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yycFGHIJ-yyxA.html]
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| * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10001]
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| === Additional information===
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| =The protein=
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| === Basic information/ Evolution ===
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| * '''Catalyzed reaction/ biological activity:'''
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| * '''Protein family:''' OmpR family of two-component transcription regulators
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| * '''Paralogous protein(s):'''
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| === Genes controlled by WalR ===
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| * '''Activation by WalR:''' ''[[cwlO]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17581128 PubMed], ''[[lytE]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17581128 PubMed], ''[[ydjM]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17581128 PubMed], ''[[ftsA]]-[[ftsZ]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/10878122 PubMed]
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| * '''Repression by WalR:''' ''[[iseA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17581128 PubMed], ''[[yjeA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17581128 PubMed]
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| === Extended information on the protein ===
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| * '''Kinetic information:'''
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| * '''Domains:'''
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| * '''Modification:'''
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| * '''Cofactor(s):'''
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| * '''Effectors of protein activity:'''
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| * '''Interactions:''' [[WalK]]-[[WalR]]
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| * '''Localization:''' cytoplasm (according to Swiss-Prot)
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| === Database entries ===
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| * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2D1V 2D1V] (DNA binding domain)
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| * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P37478 P37478]
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| * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU40410]
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| * '''E.C. number:'''
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| === Additional information===
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| =Expression and regulation=
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| * '''Operon:''' ''[[walR]]-[[walK]]-[[yycH]]-[[yycI]]-[[yycJ]]-[[yyxA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/9829949 PubMed]
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| * '''[[Sigma factor]]:'''
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| * '''Regulation:''' expressed during vegetative growth, repressed during stationary phase [http://www.ncbi.nlm.nih.gov/sites/entrez/9829949 PubMed]
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| * '''Regulatory mechanism:'''
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| * '''Additional information:'''
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| =Biological materials =
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| * '''Mutant:'''
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| * '''Expression vector:'''
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| * '''lacZ fusion:'''
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| * '''GFP fusion:'''
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| * '''two-hybrid system:'''
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| * '''Antibody:'''
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| =Labs working on this gene/protein=
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| =Your additional remarks=
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| =References=
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| # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
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