Jump to content

MccA: Difference between revisions

From SubtiWiki
Sroppel (talk | contribs)
No edit summary
Replaced content with "{{#bank: mccA}}"
 
(32 intermediate revisions by 7 users not shown)
Line 1: Line 1:
* '''Description:''' O-acetylserine-thiol-lyase <br/><br/>
{{#bank: mccA}}
 
{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''mccA ''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yrhA''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || O-acetylserine-thiol-lyase
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || methionine-to-cysteine conversion
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 32 kDa, 5.227 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 921 bp, 307 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mccB]]'', ''[[mtnN]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14668&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:yrhA_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}
 
__TOC__
 
<br/><br/>
 
=The gene=
 
=== Basic information ===
 
* '''Coordinates:'''
 
===Phenotypes of a mutant ===
 
=== Database entries ===
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yrrT-mtn-yrhABC.html]
 
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12290]
 
=== Additional information===
 
 
=The protein=
 
=== Basic information/ Evolution ===
 
* '''Catalyzed reaction/ biological activity:'''
 
* '''Protein family:'''
 
* '''Paralogous protein(s):'''
 
=== Extended information on the protein ===
 
* '''Kinetic information:'''
 
* '''Domains:'''
 
* '''Modification:'''
 
* '''Cofactor(s):'''
 
* '''Effectors of protein activity:'''
 
* '''Interactions:'''
 
* '''Localization:'''
 
=== Database entries ===
 
* '''Structure:'''
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O05393 O05393]
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU27260]
 
* '''E.C. number:'''
 
=== Additional information===
 
=Expression and regulation=
 
* '''Operon:''' ''[[yrrT]]-[[mtnN]]-[[mccA]]-[[mccB]]-[[yrhC]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/17056751 PubMed]
 
* '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed]
 
* '''Regulation:''' repressed in the presence of cysteine ([[CymR]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed]
 
* '''Regulatory mechanism:''' [[CymR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16513748 PubMed]
 
* '''Additional information:'''
 
=Biological materials =
 
* '''Mutant:'''
 
* '''Expression vector:'''
       
* '''lacZ fusion:'''
 
* '''GFP fusion:'''
 
* '''two-hybrid system:'''
 
* '''Antibody:'''
 
=Labs working on this gene/protein=
 
=Your additional remarks=
 
=References=
 
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

Latest revision as of 08:36, 10 November 2015