NusA substrates: Difference between revisions

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Latest revision as of 13:36, 16 May 2016

NusA is a transcription termination factor that stimulates termination at weak intrinsic terminators.

NusA substrates in B. subtilis

The strongest NusA-dependent terminators

metS, terminator is NusA-dependent reference
nrdR, terminator is NusA-dependent reference
xre, terminator is NusA-dependent reference
ydjM, terminator is NusA-dependent reference
yfzA, terminator is NusA-dependent reference
ypmT, terminator is NusA-dependent reference
yqxC, terminator is NusA-dependent reference
ytzE, terminator is NusA-dependent reference
yusV, terminator is NusA-dependent reference
yuxK, terminator is NusA-dependent reference

Terminators that are stimulated by NusA

nusA, stimulation of termination reference
papB, stimulation of termination reference

Terminators that are inhibited by NusA

ilvD, the terminator is inhibited by NusA reference
yetH, the terminator is inhibited by NusA reference
yvbJ, the terminator is inhibited by NusA reference
thrS, the attenuator (T-box) is inhibited by NusA reference

Reference

Mondal et al., 2016, Nature Microbiology

@@ Line 2: / Line 2: @@
 ==[[NusA]] substrates in ''B. subtilis''==
-===[[NusA]]-dependent terminators===
+=== The strongest [[NusA]]-dependent terminators===
 * ''[[metS]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
+* ''[[nrdR]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[xre]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[ydjM]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
@@ Line 9: / Line 10: @@
 * ''[[ypmT]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[yqxC]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
-* ''[[ytcG]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[ytzE]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[yusV]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[yuxK]]'', terminator is [[NusA]]-dependent [http://www.nature.com/articles/nmicrobiol20157 reference]
+=== Terminators that are stimulated by [[NusA]]===
 * ''[[nusA]]'', stimulation of termination [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[papB]]'', stimulation of termination [http://www.nature.com/articles/nmicrobiol20157 reference]
+=== Terminators that are inhibited by [[NusA]]===
+* ''[[ilvD]]'', the terminator is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference]
+* ''[[yetH]]'', the terminator is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference]
+* ''[[yvbJ]]'', the terminator is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference]
 * ''[[thrS]]'', the attenuator ([[T-box]]) is inhibited by [[NusA]] [http://www.nature.com/articles/nmicrobiol20157 reference]
 ===Reference===
 [http://www.nature.com/articles/nmicrobiol20157 Mondal et al., 2016, Nature Microbiology]