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* '''Description:''' DNA uptake, major component of the [[pseudopilus]] <br/><br/>
{{#bank: ComGC}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''comGC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || major pseudopilin
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || [[genetic competence]]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24710 comGC]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=ComGC ComGC]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in  [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=ComGC ComGC]'''
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 10 kDa, 6.325 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 294 bp, 98 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[comGD]]'', ''[[comGB]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24710 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24710 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24710 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:comGC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=comGC_2557673_2557969_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:comGC_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24710]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[genetic competence]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[ComK regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU24710
===Phenotypes of a mutant ===
* knockout has complete loss of transformation competence
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU24710&redirect=T BSU24710]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/comGABCDEFG-yqzE.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10485]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' comGC family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[ComGB]]-[[ComGC]] {{PubMed|15083159}}
** [[ComC]]-[[ComGC]] {{PubMed|9723928}}
** forms large complexes (the [[pseudopilus]]) {{PubMed|21278288}}
* '''[[Localization]]:'''
** cell surface [http://www.ncbi.nlm.nih.gov/pubmed/9723928 PubMed]
** localizes to the cell membrane and the cytoplasm {{PubMed|21278288}}
** localizes to one single cell pole in the majority of the cells {{PubMed|21278288}}
=== Database entries ==
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P25955 P25955]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU24710]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[comGA]]-[[comGB]]-[[comGC]]-[[comGD]]-[[comGE]]-[[comGF]]-[[comGG]]-[[yqzE]]'' {{PubMed|2507524}} 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=comGC_2557673_2557969_-1 comGC] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|2507524}}
* '''Regulation:'''
** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] 
* '''Regulatory mechanism:'''
** [[ComK]]: transcription activation {{PubMed|8196543}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed> 15083159 </pubmed>
==Original publications==
<pubmed>11744713,11814663,9422590,16751195,9723928,1968455,7783624,21278288,12107147, 2507524 8196543</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 15:33, 28 May 2015