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* '''Description:''' biotin synthase <br/><br/>
{{#bank: BioB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''bioB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || biotin synthase)
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of biotin
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30200 bioB]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=bioB bioB]'''
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 5.554 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1005 bp, 335 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bioI]]'', ''[[bioD]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30200 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30200 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30200 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:bioB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bioB_3090482_3091489_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:bioB_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30200]]
|-
|}
__TOC__
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<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis of cofactors]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[BirA regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU30200
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30200&redirect=T BSU30200]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/bioWAFDBI-ytbQ.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11525]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' Dethiobiotin + sulfur + 2 S-adenosyl-L-methionine = biotin + 2 L-methionine + 2 5'-deoxyadenosine (according to Swiss-Prot)
* '''Protein family:''' Biotin synthase family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):''' contains an iron-sulfur cluster
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU30200&redirect=T BSU30200]
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P53557 P53557]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30200]
* '''E.C. number:''' [http://www.expasy.org/enzyme/2.8.1.6 2.8.1.6]
=== Additional information===
* '''Operon:''' ''[[bioW]]-[[bioA]]-[[bioF]]-[[bioD]]-[[bioB]]-[[bioI]]-[[ytbQ]]'' {{PubMed|8763940,8892842}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
** repressed in the presence of biotin ([[BirA]]) {{PubMed|8763940,8892842}}
* '''Regulatory mechanism:'''
** [[BirA]]: transcription repression {{PubMed|8763940,8892842}} 
* '''Additional information:''' subject to Clp-dependent proteolysis upon glucose starvation [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&dopt=Abstract&list_uids=+17981983 PubMed]
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed>21437340</pubmed>
==Original publications==
<pubmed>8763940,8892842,17981983 , </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:03, 17 April 2014