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* '''Description:''' thiaminase II <br/><br/>
{{#bank: TenA}}
{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''tenA''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || thiaminase II
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|style="background:#ABCDEF;" align="center"|'''Function''' || thiamine salvage
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU11650 tenA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=tenA tenA]'''
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 27 kDa, 4.99 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 708 bp, 236 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yjbQ]]'', ''[[tenI]]''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU11650 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU11650 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU11650 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:tenA_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tenA_1242449_1243159_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:tenA_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU11650]]
|-
|}


__TOC__
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis of cofactors]]}},
[[most abundant proteins]]
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[Thi-box]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU11650
===Phenotypes of a mutant ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11650&redirect=T BSU11650]
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/tenAI-goxB-thiSGF-yjbV.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10791]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' Thiamine + H<sub>2</sub>O = 4-amino-5-hydroxymethyl-2-methylpyrimidine + 5-(2-hydroxyethyl)-4-methylthiazole (according to Swiss-Prot)
* '''Protein family:''' thiaminase-2 family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''[[Domains]]:'''
* '''Modification:'''
* '''[[Cofactors]]:'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU11650&redirect=T BSU11650]
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1YAF 1YAF],  [http://www.rcsb.org/pdb/explore.do?structureId=2QCX 2QCX] (complex with formyl aminommethyl pyrimidine)
* '''UniProt:''' [http://www.uniprot.org/uniprot/P25052 P25052]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU11650]
* '''E.C. number:''' [http://www.expasy.org/enzyme/3.5.99.2 3.5.99.2]
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[tenA]]-[[tenI]]-[[thiO]]-[[thiS]]-[[thiG]]-[[thiF]]-[[thiD]]'' {{PubMed|1898926}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=tenA_1242449_1243159_1 tenA] {{PubMed|22383849}}
* '''[[Sigma factor]]:'''
* '''Regulation:'''
** repressed by thiamine ([[Thi-box]]) {{PubMed|16356850}}
* '''Regulatory mechanism:'''
** [[Thi-box]]: [[RNA switch]] {{PubMed|16356850}}
* '''Additional information:'''
** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed>10382260 </pubmed>
==Original publications==
<pubmed>15709744,18054064,17618314,,16356850, 24311574 15378759</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 09:56, 17 April 2014