QueC: Difference between revisions
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{{#bank: queC}} | |||
* '''Description:''' synthesis of the modified ribonucleotide queuosine <br/><br/> | * '''Description:''' synthesis of the modified ribonucleotide queuosine <br/><br/> | ||
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=== Database entries === | === Database entries === | ||
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13720&redirect=T BSU13720] | |||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
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=== Database entries === | === Database entries === | ||
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13720&redirect=T BSU13720] | |||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3BL5 3BL5] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=3BL5 3BL5] | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
** number of protein molecules per cell (minimal medium with glucose and ammonium): 158 {{PubMed|24696501}} | |||
** number of protein molecules per cell (complex medium with amino acids, without glucose): 469 {{PubMed|24696501}} | |||
=Biological materials = | =Biological materials = | ||
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=References= | =References= | ||
<pubmed>18491386,14660578,17384645 19285444 , 19354300 24003028 21410253,21375305</pubmed> | <pubmed>18491386,14660578,17384645 19285444 , 19354300 24003028 21410253,21375305 24663240 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Latest revision as of 08:41, 11 November 2015
- Description: synthesis of the modified ribonucleotide queuosine
| Gene name | queC |
| Synonyms | ykvJ |
| Essential | no |
| Product | unknown |
| Function | tRNA modification |
| Gene expression levels in SubtiExpress: queC | |
| MW, pI | 24 kDa, 5.147 |
| Gene length, protein length | 657 bp, 219 aa |
| Immediate neighbours | ykvI, queD |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU13720
Phenotypes of a mutant
Database entries
- BsubCyc: BSU13720
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: queC family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU13720
- Structure: 3BL5
- UniProt: O31675
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- repressed in the presence of queuosine (preQ1 riboswitch) PubMed
- Regulatory mechanism:
- preQ1 riboswitch: transcriptional antitermination in the absence of queuosine PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
<pubmed>18491386,14660578,17384645 19285444 , 19354300 24003028 21410253,21375305 24663240 </pubmed>