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BsrD: Difference between revisions

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New page: * '''Description:''' small RNA <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''bsrD'' |- |style="background:#ABCD...
 
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|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  bp
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yddM]]'', ''[[yddN]]''
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''  
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE.txt    Gene sequence      (+200bp)  ]'''  
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|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
|colspan="2" | '''Genetic context''' <br/> [[Image:genE_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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<br/><br/><br/><br/><br/>
<br/><br/><br/><br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[ncRNA]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=The gene=


=== Basic information ===
=== Basic information ===


* '''Coordinates:'''
* '''Locus tag:'''


===Phenotypes of a mutant ===
===Phenotypes of a mutant ===


=== Database entries ===
=== Database entries ===
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=?&redirect=T ?]


* '''DBTBS entry:''' no entry
* '''DBTBS entry:''' no entry
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=== Additional information===
=== Additional information===




=Expression and regulation=
=Expression and regulation=


* '''Operon:'''  
* '''Operon:''' ''bsrD'' {{PubMed|18948176}}


* '''Sigma factor:'''  
* '''Sigma factor:'''  
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=References=
=References=


# Saito S, Kakeshita H, Nakamura K (2009) Novel small RNA-encoding genes in the intergenic regions of ''Bacillus subtilis''. ''Gene'' '''428:''' 2-8. [http://www.ncbi.nlm.nih.gov/sites/entrez/18948176 PubMed]
<pubmed>18948176, </pubmed>
 
[[Category:small RNA]]

Latest revision as of 15:23, 2 April 2014

  • Description: small RNA

Gene name bsrD
Synonyms
Essential no
Product small RNA
Function unknown
Gene length bp
Immediate neighbours yddM, yddN
Gene sequence (+200bp)
Genetic context
File:GenE context.gif
This image was kindly provided by SubtiList








Categories containing this gene/protein

ncRNA

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag:

Phenotypes of a mutant

Database entries

  • BsubCyc: ?
  • DBTBS entry: no entry
  • SubtiList entry: no entry
  • Structure:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:


Labs working on this gene/RNA

Kouji Nakamura, Tsukuba, University, Japan

Your additional remarks

References

<pubmed>18948176, </pubmed>